| MirGeneDB ID | Lch-Mir-599 |
|---|---|
| Family name | MIR-599 (all species) |
| Seed | UUGAUAA |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Ami-Mir-599 Bta-Mir-599 Cfa-Mir-599 Cli-Mir-599 Cpi-Mir-599 Ete-Mir-599 Hsa-Mir-599 Mdo-Mir-599 Mml-Mir-599 Mmu-Mir-599 Mun-Mir-599 Oan-Mir-599 Ocu-Mir-599 Pbv-Mir-599 Sha-Mir-599 Spt-Mir-599 Tgu-Mir-599 |
| Node of Origin (locus) | Sarcopterygii |
| Node of Origin (family) | Sarcopterygii |
| Genome context (LatCha1_add) |
JH126816.1: 823702-823760 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | UAGAUAUAAGCAUUCACAGUCCAUAGUGUGUUUGAUAAGCAGACAUGAGACAGGCAUCUUUCUCACUGUUGUGUCAGUUCAUCAAACCCAUACCUGGACAUCAUUUUCUACUCCAGCUUGet precursor sequence |
| Structure | 10 20 30 40 50 UAGAUAUAAGCAUUCACA-- UA-| U A A GA GGCAUC GUCCA GUG GUUUGAU AGC GACAU GACA U CAGGU UAC CAAACUA UUG CUGUG UUGU U UUCGACCUCAUCUUUUACUA CCA^ C C A -- CACUCU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Lch-Mir-599_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UUUGAUAAGCAGACAUGAGACA -22
Get sequence
|
| Star sequence | Lch-Mir-599_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- UUGUGUCAGUUCAUCAAACCC -59
Get sequence
|
