MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-137-P3

Family name MIR-137 (all species)
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-137b
Paralogues Mdo-Mir-137-P1-v1  Mdo-Mir-137-P3-v1 
Orthologues Aca-Mir-137-P3-v1  Aga-Mir-137  Agr-Mir-137  Ami-Mir-137-P3-v1  Asu-Mir-137  Ava-Mir-137  Bfl-Mir-137  Bko-Mir-137  Bpl-Mir-137  Cbr-Mir-137  Cel-Mir-137  Cli-Mir-137-P3  Cpi-Mir-137-P3-v1  Cte-Mir-137  Dan-Mir-137  Dgr-Mir-137  Dma-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dpu-Mir-137  Dsi-Mir-137  Dya-Mir-137  Eba-Mir-137  Ebu-Mir-137  Esc-Mir-137  Gga-Mir-137-P3-v1  Gja-Mir-137-P3  Gmo-Mir-137-P3a-v1  Gmo-Mir-137-P3b-v1  Gpa-Mir-137  Hme-Mir-137  Hru-Mir-137  Isc-Mir-137  Lan-Mir-137  Lch-Mir-137-P3  Lgi-Mir-137  Lhy-Mir-137  Llo-Mir-137  Loc-Mir-137-P3-v1  Mal-Mir-137-P3a-v1  Mal-Mir-137-P3b-v1  Mgi-Mir-137  Mom-Mir-137  Mun-Mir-137-P3  Neu-Mir-137-P3  Oan-Mir-137-P3-v1  Obi-Mir-137  Ofu-Mir-137  Pau-Mir-137  Pbv-Mir-137-P3-v1  Pca-Mir-137  Pdu-Mir-137  Pma-Mir-137-o3  Pve-Mir-137  Rph-Mir-137  Sha-Mir-137-P3  Sko-Mir-137  Snu-Mir-137  Spu-Mir-137  Tni-Mir-137-P3b  Tur-Mir-137  War-Mir-137  Xbo-Mir-137 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(monDom5_add)		 3: 429645669-429645729 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-137-P3-v2)		 Mir-137-P3-v2 3: 429645669-429645729 [-] UCSC Ensembl
Mir-137-P3-v1 3: 429645670-429645728 [-] UCSC Ensembl
Variant

Mdo-Mir-137-P3-v2
Seed AUUGCUU
Precursor
(pre-Mir +30nt flank)		 
ACCCUACCCCAUUGCCUAGCCCCCCGCGAUGACGGGUAUUCUUGGGUAGAUAAUACCAAUGGCGCUGUUAUUGCUUGAGAAUACACGUAGUCGAGGGGAGGCCUCUUCGACGAUCCCCACC
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Structure
        10         20         30        40        50        60
ACCCUACCCCAUUGCCUA-   -|   G    G   G       UG     A    ACCAA 
                   GCC CCCC CGAU ACG GUAUUCU  GGUAG UAAU     U
                   CGG GGGG GCUG UGC CAUAAGA  UCGUU AUUG     G
CCACCCCUAGCAGCUUCUC   A^   A    A   A       GU     -    UCGCG 
 .       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce He Ki Te
Star sequence

Mdo-Mir-137-P3-v2_5p* (predicted)
mirBase accessionMIMAT0028552
Sequence 
0- GACGGGUAUUCUUGGGUAGAUAAU -24
Get sequence
Proposed targets TargetScanVert: mdo-miR-137b-5p
Mature sequence

Mdo-Mir-137-P3-v2_3p
mirBase accessionMIMAT0028553
Sequence 
38- UAUUGCUUGAGAAUACACGUAGU -61
Get sequence
Proposed targets TargetScanVert: mdo-miR-137b-3p
Variant

Mdo-Mir-137-P3-v1
Seed UAUUGCU
Precursor
(pre-Mir +30nt flank)		 
CCCUACCCCAUUGCCUAGCCCCCCGCGAUGACGGGUAUUCUUGGGUAGAUAAUACCAAUGGCGCUGUUAUUGCUUGAGAAUACACGUAGUCGAGGGGAGGCCUCUUCGACGAUCCCCAC
Get precursor sequence
Structure
        10         20         30        40        50         
CCCUACCCCAUUGCCUA-   -|   G    G   G       UG     A     CCAA 
                  GCC CCCC CGAU ACG GUAUUCU  GGUAG UAAUA    U
                  CGG GGGG GCUG UGC CAUAAGA  UCGUU AUUGU    G
CACCCCUAGCAGCUUCUC   A^   A    A   A       GU     -     CGCG 
       110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce He Ki Te
Star sequence

Mdo-Mir-137-P3-v1_5p*
mirBase accessionMIMAT0028552
Sequence 
0- ACGGGUAUUCUUGGGUAGAUAAUA -24
Get sequence
Proposed targets TargetScanVert: mdo-miR-137b-5p
Mature sequence

Mdo-Mir-137-P3-v1_3p
mirBase accessionMIMAT0028553
Sequence 
36- UUAUUGCUUGAGAAUACACGUAG -59
Get sequence
Proposed targets TargetScanVert: mdo-miR-137b-3p