MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-130-P3b

Family name MIR-130 (all species)
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID
Paralogues Mdo-Mir-130-P1a  Mdo-Mir-130-P1b  Mdo-Mir-130-P1c  Mdo-Mir-130-P2b  Mdo-Mir-130-P4a 
Orthologues Bta-Mir-130-P3b  Cfa-Mir-130-P3b  Cja-Mir-130-P3b  Cmi-Mir-130-P3b  Cpo-Mir-130-P3b  Dno-Mir-130-P3b  Dre-Mir-130-P3b1  Eca-Mir-130-P3b  Gmo-Mir-130-P3b1  Hsa-Mir-130-P3b  Laf-Mir-130-P3b  Lch-Mir-130-P3b  Mml-Mir-130-P3b  Neu-Mir-130-P3b  Oan-Mir-130-P3b  Pab-Mir-130-P3b  Sha-Mir-130-P3b  Sto-Mir-130-P3b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)		 2: 172999062-172999126 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-130-P3b)		 Mir-130-P1b 2: 172985794-172985856 [+] UCSC Ensembl
Mir-130-P2b 2: 172986787-172986848 [+] UCSC Ensembl
Mir-130-P3b 2: 172999062-172999126 [+] UCSC Ensembl
Seed AGUGCAA
Precursor
(pre-Mir +30nt flank)		 
AUUUCUUGUUGAUAAUUAAUAGAUCCAUGAACCCUAUCAAUGUGGUCUCUGCUGUGUACAUAGCUGUAAGUAGUGCAAUAUUGCUUAUAGGGUUUUAGUUUUUGGAAAGAACAGUGGCCAAGCUG
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Structure
        10        20              30           40        50        60 
AUUUCUUGUUGAUAAUUAAUAGA    U------         ---|     G  CU     GUGUACA 
                       UCCA       GAACCCUAU   CAAUGU GU  CUGCU       \
                       AGGU       UUUGGGAUA   GUUAUA CG  GAUGA       U
GUCGAACCGGUGACAAGAA----    UUUUGAU         UUC^     A  U-     AUGUCGA 
   120       110           100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
- +
Br Ce He Ki Te
Star sequence

Mdo-Mir-130-P3b_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACCCUAUCAAUGUGGUCUCUGCU -23
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Mature sequence

Mdo-Mir-130-P3b_3p (predicted)
mirBase accessionNone
Sequence 
40- UAGUGCAAUAUUGCUUAUAGGGUUU -65
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