MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-130-P3b

Family name MIR-130 (all species)
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-130-P1c  Laf-Mir-130-P2a  Laf-Mir-130-P2b  Laf-Mir-130-P4a 
Orthologues Bta-Mir-130-P3b  Cfa-Mir-130-P3b  Cja-Mir-130-P3b  Cmi-Mir-130-P3b  Cpo-Mir-130-P3b  Dno-Mir-130-P3b  Dre-Mir-130-P3b1  Eca-Mir-130-P3b  Gmo-Mir-130-P3b1  Hsa-Mir-130-P3b  Lch-Mir-130-P3b  Mdo-Mir-130-P3b  Mml-Mir-130-P3b  Neu-Mir-130-P3b  Oan-Mir-130-P3b  Pab-Mir-130-P3b  Sha-Mir-130-P3b  Sto-Mir-130-P3b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010058.1: 9743009-9743072 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-130-P3b)		 Mir-130-P2b GL010058.1: 9734224-9734285 [+] UCSC Ensembl
Mir-130-P3b GL010058.1: 9743009-9743072 [+] UCSC Ensembl
Seed AGUGCAA
Precursor
(pre-Mir +30nt flank)		 
AAAAUUUCCUGUUUAUUACCAGAUCCUAGAACCCUAUCGAUAUUGUCUCUGCUGUAUAAAUAGUUCUGAGUAGUGCAAUAUUGCUUAUAGGGUUUUAGUGUUUGGGAAGAACGAUGGGCAGACU
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Structure
        10         20        30           40        50        60 
AAAAUUUCCUGUUUAUUA-     UC            ---|        CU     GUAUAAA 
                   CCAGA  CUAGAACCCUAU   CGAUAUUGU  CUGCU       \
                   GGUUU  GAUUUUGGGAUA   GUUAUAACG  GAUGA       U
UCAGACGGGUAGCAAGAAG     GU            UUC^        U-     GUCUUGA 
  120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Wh
Star sequence

Laf-Mir-130-P3b_5p*
mirBase accessionNone
Sequence 
0- ACCCUAUCGAUAUUGUCUCUGCU -23
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Mature sequence

Laf-Mir-130-P3b_3p
mirBase accessionNone
Sequence 
40- UAGUGCAAUAUUGCUUAUAGGGUU -64
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