MirGeneDB ID | Mal-Mir-137-P3a-v2 |
Family name |
MIR-137 (all species) |
Seed |
AUUGCUU |
Species |
Asian swamp eel (Monopterus albus) |
MiRBase ID |
|
Paralogues |
Mal-Mir-137-P1b-v1
Mal-Mir-137-P1b-v2
Mal-Mir-137-P3a-v1
Mal-Mir-137-P3b-v1
Mal-Mir-137-P3b-v2
|
Orthologues |
Aca-Mir-137-P3-v1
Aca-Mir-137-P3-v2
Ami-Mir-137-P3-v1
Ami-Mir-137-P3-v2
Asu-Mir-137
Bfl-Mir-137
Cbr-Mir-137
Cel-Mir-137
Cgi-Mir-137
Cli-Mir-137-P3
Cpi-Mir-137-P3-v1
Cpi-Mir-137-P3-v2
Cte-Mir-137
Dan-Mir-137
Dma-Mir-137
Dme-Mir-137
Dmo-Mir-137
Dpu-Mir-137
Dsi-Mir-137
Dya-Mir-137
Ebu-Mir-137
Esc-Mir-137
Gga-Mir-137-P3-v1
Gga-Mir-137-P3-v2
Gja-Mir-137-P3
Gmo-Mir-137-P3a-v1
Gmo-Mir-137-P3a-v2
Hme-Mir-137
Isc-Mir-137
Lan-Mir-137
Lch-Mir-137-P3
Lgi-Mir-137
Loc-Mir-137-P3-v1
Loc-Mir-137-P3-v2
Mdo-Mir-137-P3-v1
Mdo-Mir-137-P3-v2
Mun-Mir-137-P3
Oan-Mir-137-P3-v1
Oan-Mir-137-P3-v2
Obi-Mir-137
Pbv-Mir-137-P3-v1
Pbv-Mir-137-P3-v2
Pma-Mir-137-o3
Sha-Mir-137-P3
Sko-Mir-137
Spu-Mir-137
Xbo-Mir-137
|
Node of Origin (locus) |
Clupeocephala
|
Node of Origin (family) |
Bilateria
|
Genome context (GCA_001952655.1_M_albus_1.0_genomic) |
KV884980.1: 354664-354724 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GGUGGCGUGACCGCUUGCUCCCGUCUCGACCACGGGUAUUCUUGGGUUGAUAAUACAGAUGUCGAUGUUAUUGCUUGAGAAUACGCGUAGCUGAGCGGAAGCCAUCGUCAGCGGCGGCACA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GGUGGCGUGACCGCUUG---| C U ACC G UG U ACAGA
CU CCG CUCG ACG GUAUUCU GGU GAUAAU U
GA GGC GAGU UGC CAUAAGA UCG UUAUUG G
ACACGGCGGCGACUGCUACC^ A - CGA G GU - UAGCU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Mal-Mir-137-P3a-v2_5p* |
mirBase accession | None |
Sequence |
0- CACGGGUAUUCUUGGGUUGAUAAU -24
Get sequence
|
Mature sequence |
Mal-Mir-137-P3a-v2_3p |
mirBase accession | None |
Sequence |
38- UAUUGCUUGAGAAUACGCGUAGC -61
Get sequence
|