MirGeneDB 3.0
MirGeneDB ID

Gmo-Mir-137-P3b

Family name MIR-137 (all species)
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-137-1
Paralogues Gmo-Mir-137-P1b-v1  Gmo-Mir-137-P3a-v1  Gmo-Mir-137-P3b-v1 
Orthologues Aca-Mir-137-P3-v1  Aga-Mir-137  Agr-Mir-137  Ami-Mir-137-P3-v1  Asu-Mir-137  Ava-Mir-137  Bfl-Mir-137  Bko-Mir-137  Bpl-Mir-137  Cbr-Mir-137  Cel-Mir-137  Cli-Mir-137-P3  Cpi-Mir-137-P3-v1  Cte-Mir-137  Dan-Mir-137  Dgr-Mir-137  Dma-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dpu-Mir-137  Dsi-Mir-137  Dya-Mir-137  Eba-Mir-137  Ebu-Mir-137  Esc-Mir-137  Gga-Mir-137-P3-v1  Gja-Mir-137-P3  Gpa-Mir-137  Hme-Mir-137  Hru-Mir-137  Isc-Mir-137  Lan-Mir-137  Lch-Mir-137-P3  Lgi-Mir-137  Lhy-Mir-137  Llo-Mir-137  Loc-Mir-137-P3-v1  Mal-Mir-137-P3b-v1  Mdo-Mir-137-P3-v1  Mgi-Mir-137  Mom-Mir-137  Mun-Mir-137-P3  Neu-Mir-137-P3  Oan-Mir-137-P3-v1  Obi-Mir-137  Ofu-Mir-137  Pau-Mir-137  Pbv-Mir-137-P3-v1  Pca-Mir-137  Pdu-Mir-137  Pma-Mir-137-o3  Pve-Mir-137  Rph-Mir-137  Sha-Mir-137-P3  Sko-Mir-137  Snu-Mir-137  Spu-Mir-137  Tni-Mir-137-P3b  Tur-Mir-137  War-Mir-137  Xbo-Mir-137 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 contig488330: 29-89 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-137-P3b-v2)		 Mir-137-P3b-v2 contig488330: 29-89 [-] UCSC Ensembl
Mir-137-P3b-v1 contig488330: 30-88 [-] UCSC Ensembl
Variant

Gmo-Mir-137-P3b-v2
Seed AUUGCUU
Precursor
(pre-Mir +30nt flank)		 
UACGGGUAUUCUUGGGUUGAUAAUACAGAUGUGGAUGUUAUUGCUUGAGAAUACGCGUAGU
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Structure
          10          20         
--    G       UG   --     A-|  A 
  UACG GUAUUCU  GGU  UGAUA  UAC G
  AUGC CAUAAGA  UCG  AUUGU  GUG A
UG    G       GU   UU     AG^  U 
60        50        40        30
Deep sequencing
3' NTU No
MotifsNo
Star sequence

Gmo-Mir-137-P3b-v2_5p*
mirBase accessionMIMAT0044057
Sequence 
0- UACGGGUAUUCUUGGGUUGAUAA -23
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Mature sequence

Gmo-Mir-137-P3b-v2_3p
mirBase accessionMIMAT0044058
Sequence 
38- UAUUGCUUGAGAAUACGCGUAGU -61
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Variant

Gmo-Mir-137-P3b-v1
Seed UAUUGCU
Precursor
(pre-Mir +30nt flank)		 
ACGGGUAUUCUUGGGUUGAUAAUACAGAUGUGGAUGUUAUUGCUUGAGAAUACGCGUAG
Get precursor sequence
Structure
          10          20        
--   G       UG   --     A-|  A 
  ACG GUAUUCU  GGU  UGAUA  UAC G
  UGC CAUAAGA  UCG  AUUGU  GUG A
GA   G       GU   UU     AG^  U 
        50        40        30
Deep sequencing
3' NTU No
MotifsNo
Star sequence

Gmo-Mir-137-P3b-v1_5p*
mirBase accessionMIMAT0044057
Sequence 
0- ACGGGUAUUCUUGGGUUGAUAAU -23
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Mature sequence

Gmo-Mir-137-P3b-v1_3p
mirBase accessionMIMAT0044058
Sequence 
36- UUAUUGCUUGAGAAUACGCGUAG -59
Get sequence