MirGeneDB 2.1
MirGeneDB ID

Ebu-Mir-122-P4

Family name MIR-122 (all species)
Seed GGAGUGU
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-122-P3 
Orthologues Aca-Mir-122  Ami-Mir-122  Bta-Mir-122  Cfa-Mir-122  Cli-Mir-122  Cmi-Mir-122  Cpi-Mir-122  Cpo-Mir-122  Dno-Mir-122  Dre-Mir-122  Ete-Mir-122  Gja-Mir-122  Gmo-Mir-122  Hsa-Mir-122  Lch-Mir-122  Loc-Mir-122  Mal-Mir-122  Mdo-Mir-122  Mml-Mir-122  Mmu-Mir-122  Mun-Mir-122  Oan-Mir-122  Ocu-Mir-122  Pbv-Mir-122  Pma-Mir-122  Rno-Mir-122  Sha-Mir-122  Spt-Mir-122  Sto-Mir-122  Tgu-Mir-122  Tni-Mir-122  Xtr-Mir-122 
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02000161.1: 952174-952232 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUACAGUCAUGCUUGUUGCCAUCACAGCGAUGGAGUGUGACAAUGGUGUUUGUGUCUGUCAUGUUCAAACGCCAUUGUCACACUAAUUCGCUGAGGCAUGCAGUGCAGCAUAUUGAUGG
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Structure
        10             20        30        40        50         
UUACAGUCAUGCUUGUU-----|  AUCA      UGG                   UGUCUG 
                      GCC    CAGCGA   AGUGUGACAAUGGUGUUUG      \
                      CGG    GUCGCU   UCACACUGUUACCGCAAAC      U
GGUAGUUAUACGACGUGACGUA^  A---      UAA                   UUGUAC 
       110       100           90        80        70        60
Deep sequencing
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CommentThe 5p read is mono-adenylated at the 3p end.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-122-P4_5p
mirBase accessionNone
Sequence 
0- UGGAGUGUGACAAUGGUGUUUG -22
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Star sequence

Ebu-Mir-122-P4_3p*
mirBase accessionNone
Sequence 
37- AACGCCAUUGUCACACUAAUUC -59
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