MirGeneDB 2.1

MirGeneDB ID

Dme-Mir-216-P1

Family name MIR-216 (all species)
Seed AAUAUCA
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-283
Paralogues Dme-Mir-216-P2 
Orthologues Aae-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cgi-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dma-Mir-216-P1  Dmo-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Efe-Mir-216-P1a  Efe-Mir-216-P1b  Esc-Mir-216-P1  Hme-Mir-216-P1  Lan-Mir-216-P1e  Lan-Mir-216-P1f  Lgi-Mir-216-P1  Tca-Mir-216-P1 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Drosophila_melanogaster_BDGP6)
X: 15507976-15508044 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-216-P1)
Mir-216-P1 X: 15507976-15508044 [+] UCSC Ensembl
Mir-216-P2 X: 15508970-15509037 [+] UCSC Ensembl
Mir-12 X: 15509479-15509542 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAGUGUCACCUCACACGAUUCUCAAAGGUAAAUAUCAGCUGGUAAUUCUGGGAGCUAAGCCUAAAUAUGAAACACUCGGAAUUUCAGUUGGUAUCGACUUUUUUGAAUUGCAUUUGAUCACCAUAAGC
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Structure
        10          20        30        40        50        60    
AAAGUGUCACCUCACAC--|    UC      AA           U         AGCUAAGCCU 
                   GAUUC  AAAGGU  AUAUCAGCUGG AAUUCUGGG          A
                   UUAAG  UUUUCA  UAUGGUUGACU UUAAGGCUC          A
CGAAUACCACUAGUUUACG^    UU      GC           -         ACAAAGUAUA 
       120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Bo He L3 Fe Fe La Wh
Mature sequence

Dme-Mir-216-P1_5p

mirBase accessionMIMAT0000347
Sequence
0- AAAUAUCAGCUGGUAAUUCUGGG -23
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Proposed targets microrna.org: MIMAT0000347
TargetScanFly: dme-miR-283
Star sequence

Dme-Mir-216-P1_3p*

mirBase accessionMIMAT0020810
Sequence
47- CGGAAUUUCAGUUGGUAUCGAC -69
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