MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-216-P1f

Family name MIR-216 (all species)
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-216-P1e  Lan-Mir-216-P2d1  Lan-Mir-216-P2d2 
Orthologues Aae-Mir-216-P1  Aga-Mir-216-P1  Agr-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dgr-Mir-216-P1  Dlo-Mir-216-P1  Dma-Mir-216-P1  Dme-Mir-216-P1  Dmo-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Eba-Mir-216-P1  Esc-Mir-216-P1  Gpa-Mir-216-P1  Hme-Mir-216-P1  Hru-Mir-216-P1  Lgi-Mir-216-P1  Lhy-Mir-216-P1  Mgi-Mir-216-P1  Mom-Mir-216-P1  Ofu-Mir-216-P1  Pau-Mir-216-P1  Pca-Mir-216-P1  Pcr-Mir-216-P1  Pdu-Mir-216-P1  Pve-Mir-216-P1  Rph-Mir-216-P1  Sma-Mir-216-P1  Snu-Mir-216-P1  Tca-Mir-216-P1  War-Mir-216-P1 
Node of Origin (locus) L. anatina
Node of Origin (family) Nephrozoa
Genome context
(LinAna_1.0)		 LFEI01000141: 487686-487743 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-216-P1f)		 Mir-216-P1f LFEI01000141: 487686-487743 [+] Ensembl
Mir-216-P2d2 LFEI01000141: 488334-488395 [+] Ensembl
Mir-12-P4 LFEI01000141: 488714-488773 [+] Ensembl
Seed AAUAUCA
Precursor
(pre-Mir +30nt flank)		 
GUUGGUGUUGUCGUGUUGUGCGCGGUUUCCAAAUAUCAGCUGGUAAUUCUGGGCUCUUAAUUUGCUCAGAAUUCUAUCUGGUAUUGGGGAAUCCUUGCACCUCUCACUGUGUCUAUAA
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Structure
        10         20        30         40        50         
GUUGGUGUUGUCGUGUU-     C  U    A-|       C   U         CUCUU 
                  GUGCG GG UUCC  AAUAUCAG UGG AAUUCUGGG     \
                  CACGU CC AAGG  UUAUGGUC AUC UUAAGACUC     A
AAUAUCUGUGUCACUCUC     U  U    GG^       U   -         GUUUA 
      110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
- +
To To
Mature sequence

Lan-Mir-216-P1f_5p
mirBase accessionNone
Sequence 
0- AAAUAUCAGCUGGUAAUUCUGGG -23
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Star sequence

Lan-Mir-216-P1f_3p* (predicted)
mirBase accessionNone
Sequence 
36- CAGAAUUCUAUCUGGUAUUGGG -58
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