| MirGeneDB ID | Cli-Mir-1677-P6 |
|---|
| Family name |
MIR-1677 (all species) |
|---|
| Seed |
UGACUUA |
|---|
| Species |
Rock pigeon (Columba livia) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Cli-Mir-1677-P1
Cli-Mir-1677-P2
Cli-Mir-1677-P4
Cli-Mir-1677-P5
|
|---|
| Orthologues |
Cpi-Mir-1677-o6
Gga-Mir-1677-P6
Tgu-Mir-1677-P6
|
|---|
| Node of Origin (locus) |
Neognathae
|
|---|
| Node of Origin (family) |
Diapsida
|
|---|
Genome context
(colLiv2) |
scaffold231: 75600-75657 [+]
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAGCCUUGACUGUUAGCCUUUGGGAUGCAAACCUGCUCUCAUUUAAGUCAAUGUGAGUUUUAUCAUUGACUUAAUUGGAAGUGAGAUUGAGCCACUGGGCAUGUGAGUGGCUUUGAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAGCCUUGACUGUUAGC---| UUG AUG AC - CU U UGAG
CU GG CAA CU GCU CA UUAAGUCAAUG U
GG CC GUU GA UGA GU AAUUCAGUUAC U
UGAGUUUCGGUGAGUGUACG^ UCA GA- A- G AG U UAUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Cli-Mir-1677-P6_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- ACCUGCUCUCAUUUAAGUCAAUG -23
Get sequence
|
|---|
| Mature sequence |
Cli-Mir-1677-P6_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
35- UUGACUUAAUUGGAAGUGAGAUU -58
Get sequence
|
|---|
