MirGeneDB 3.0
MirGeneDB ID

Cli-Mir-1677-P1

Family name MIR-1677 (all species)
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-1677
Paralogues Cli-Mir-1677-P2  Cli-Mir-1677-P4  Cli-Mir-1677-P5  Cli-Mir-1677-P6 
Orthologues Aca-Mir-1677-o1  Cpi-Mir-1677-P1a1  Cpi-Mir-1677-P1a2  Cpi-Mir-1677-P1b  Gga-Mir-1677-P1  Tgu-Mir-1677-P1 
Node of Origin (locus) Archelosauria
Node of Origin (family) Diapsida
Genome context
(colLiv2)		 scaffold1299: 480160-480216 [+]
Seed UGACUUC
Precursor
(pre-Mir +30nt flank)		 
AAGAUGUUAGCUGUGUUGCUUAGGGUCUGAUCCUGCACCGCUGAAGUCAAUGGAAGUUUUGUCAUUGACUUCAAUAGGAGCAGGAUUUGAACCUUAUGCUCUAUCAGAACACACAGG
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Structure
        10         20         30        40         50       
AAGAUGUUAGCUGUGUU-  U     -  U        A  GC-|          GAAG 
                  GC UAGGG UC GAUCCUGC CC   UGAAGUCAAUG    U
                  CG AUUCC AG UUAGGACG GG   ACUUCAGUUAC    U
GGACACACAAGACUAUCU  U     A  U        A  AUA^          UGUU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Li Mi Ov Pe Te To
Star sequence

Cli-Mir-1677-P1_5p*
mirBase accessionMIMAT0038691
Sequence 
0- UCCUGCACCGCUGAAGUCAAUG -22
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Mature sequence

Cli-Mir-1677-P1_3p
mirBase accessionMIMAT0038692
Sequence 
34- UUGACUUCAAUAGGAGCAGGAUU -57
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