MirGeneDB 2.1
MirGeneDB ID

Cli-Mir-1677-P5

Family name MIR-1677 (all species)
Seed UUGACUU
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-1803-1
Paralogues Cli-Mir-1677-P1  Cli-Mir-1677-P2  Cli-Mir-1677-P4  Cli-Mir-1677-P6 
Orthologues Ami-Mir-1677-o5  Gga-Mir-1677-P5  Tgu-Mir-1677-P5 
Node of Origin (locus) Neognathae
Node of Origin (family) Diapsida
Genome context
(colLiv2)		 scaffold173: 2790627-2790680 [+]
Precursor
(pre-Mir +30nt flank)
UACGUUAAUGAAGAGCUUGGGGCAUGAACCAGAGCCCAUUGUAGUCAAUGGGAGUCUUUUUCCAUUGACUUCAGUGGGGUUUGAAUCAGGCCUUUACUUCCUAAAAUGAAUAGA
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Structure
        10          20        30        40        50      
UACGUUAAUGAAGAGCUU--|    A   AC    G       U         GAGU 
                    GGGGC UGA  CAGA CCCAUUG AGUCAAUGG    C
                    UUCCG ACU  GUUU GGGUGAC UCAGUUACC    U
AGAUAAGUAAAAUCCUUCAU^    G   AA    G       U         UUUU 
  110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Cl Cl Cl Cl Cl To
Star sequence

Cli-Mir-1677-P5_5p*
mirBase accessionMIMAT0038703
Sequence 
0- AGAGCCCAUUGUAGUCAAUGG -21
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Mature sequence

Cli-Mir-1677-P5_3p
mirBase accessionMIMAT0038704
Sequence 
33- AUUGACUUCAGUGGGGUUUGA -54
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