MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-361

Family name MIR-361 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-361
Paralogues
Orthologues Bta-Mir-361-v1  Cja-Mir-361-v1  Cpo-Mir-361-v1  Dno-Mir-361-v1  Eca-Mir-361-v1  Ete-Mir-361-v1  Hsa-Mir-361-v1  Laf-Mir-361  Mml-Mir-361-v1  Mmr-Mir-361-v1  Mmu-Mir-361-v1  Ocu-Mir-361-v1  Pab-Mir-361-v1  Rno-Mir-361-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 66698698-66698760 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-361-v1)		 Mir-361-v1 chrX: 66698698-66698760 [-] UCSC Ensembl
Mir-361-v2 chrX: 66698699-66698759 [-] UCSC Ensembl
Variant

Cfa-Mir-361-v1
Seed UAUCAGA
Precursor
(pre-Mir +30nt flank)		 
GACAGUGAUUCUUCCCUGGGACUUGGGAGUUUAUCAGAAUCUCCAGGGGUACUUAAAAUUUGAAAAAGUCCCCCAGGUGUGAUUCUGAUUUGCUCCCUCUUCCUCUUUCUCUGAGAAUCACUG
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Structure
        10          20        30        40          50          
GACAGUGAUUCUUCCCU--    CUU      UU         U--| A    U  UUAAAAU 
                   GGGA   GGGAGU  AUCAGAAUC   CC GGGG AC       \
                   UCCU   CCCUCG  UAGUCUUAG   GG CCCC UG       U
GUCACUAAGAGUCUCUUUC    UCU      UU         UGU^ A    C  AAAAAGU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-361-v1_5p
mirBase accessionMIMAT0006751
Sequence 
0- UUAUCAGAAUCUCCAGGGGUAC -22
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Proposed targets TargetScanVert: cfa-miR-361
miRDB: MIMAT0006751
Star sequence

Cfa-Mir-361-v1_3p*
mirBase accessionNone
Sequence 
39- CCCCCAGGUGUGAUUCUGAUUUGC -63
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Variant

Cfa-Mir-361-v2
Seed CCCCCAG
Precursor
(pre-Mir +30nt flank)		 
ACAGUGAUUCUUCCCUGGGACUUGGGAGUUUAUCAGAAUCUCCAGGGGUACUUAAAAUUUGAAAAAGUCCCCCAGGUGUGAUUCUGAUUUGCUCCCUCUUCCUCUUUCUCUGAGAAUCACU
Get precursor sequence
Structure
        10          20        30        40          50         
ACAGUGAUUCUUCCCUG--   CUU      UU         U--| A    U   UAAAAU 
                   GGA   GGGAGU  AUCAGAAUC   CC GGGG ACU      \
                   CCU   CCCUCG  UAGUCUUAG   GG CCCC UGA      U
UCACUAAGAGUCUCUUUCU   UCU      UU         UGU^ A    C   AAAAGU 
 .       110       100        90        80        70        60
Deep sequencing
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CommentThe mature form of this variant is most highly expressed as a 2 nt shorter form but is rarely accompanied by a 19 nt corresponding 5p star read.
3' NTU No
MotifsNo
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-361-v2_5p*
mirBase accessionMIMAT0006751
Sequence 
0- UAUCAGAAUCUCCAGGGGUACU -22
Get sequence
Proposed targets TargetScanVert: cfa-miR-361
miRDB: MIMAT0006751
Mature sequence

Cfa-Mir-361-v2_3p
mirBase accessionNone
Sequence 
37- UCCCCCAGGUGUGAUUCUGAUUUG -61
Get sequence