Mir-1805

MirGeneDB ID

Aca-Mir-1805

Family name

MIR-1805 (all species)

Seed

GUAUUGG

Species

Green anole lizard (Anolis carolinensis)

MiRBase ID

aca-mir-1805

Paralogues

Orthologues

Ami-Mir-1805 Cli-Mir-1805 Cpi-Mir-1805 Gga-Mir-1805 Gja-Mir-1805-P3 Gja-Mir-1805-P4 Mdo-Mir-1805 Pbv-Mir-1805 Sha-Mir-1805 Spt-Mir-1805 Tgu-Mir-1805 Xla-Mir-1805-P1 Xla-Mir-1805-P2 Xtr-Mir-1805

Node of Origin (locus)

Tetrapoda

Node of Origin (family)

Tetrapoda

Genome context
(anoCar2)

3: 110979911-110979971 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GCAUGAUGUGAAAGAACGGAACAUUCUAGGAGUUGUAGUCUUUCAAACAGAGCUUUGCAAGUACAUACCUGUAUUGGAACACUACAGCUCCAGGAACUUUCCAGUGUCACUGGCUGUGAAA

Get precursor sequence

Structure

        10          20        30        40         50         
GCAUGAUGUGAAAGAAC--    CA    A           C      -|   AGCUUUGC 
                   GGAA  UUCU GGAGUUGUAGU UUUCAA ACAG        A
                   CCUU  AAGG CCUCGACAUCA AAGGUU UGUC        A
AAAGUGUCGGUCACUGUGA    UC    A           C      A^   CAUACAUG 
 .       110       100        90        80        70        60