MirGeneDB 2.1
MirGeneDB ID

Gja-Mir-1805-P4

Family name MIR-1805 (all species)
Seed GUAUUGG
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-1805-P3 
Orthologues Aca-Mir-1805  Ami-Mir-1805  Cli-Mir-1805  Cpi-Mir-1805  Gga-Mir-1805  Mdo-Mir-1805  Pbv-Mir-1805  Sha-Mir-1805  Spt-Mir-1805  Tgu-Mir-1805  Xtr-Mir-1805 
Node of Origin (locus) G. japonicus
Node of Origin (family) Tetrapoda
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015217873.1: 798-858 [-]
Precursor
(pre-Mir +30nt flank)
GAAGUACAUGAAAGACUGGAAUAUUCUGGGAGUUGUAGUCUUUCAAACAGAGCUCUGCAAGUAUAUACCUGUAUUGGAACACUACAGCUCCAGGAACUUCCUAGUGUCACUGGCUGUGAAA
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Structure
        10           20        30        40         50         
GAAGUACAUGAAAGACU---|   UA    G           C      -    AGCUCUGC 
                    GGAA  UUCU GGAGUUGUAGU UUUCAA ACAG        A
                    CCUU  AAGG CCUCGACAUCA AAGGUU UGUC        A
AAAGUGUCGGUCACUGUGAU^   C-    A           C      A    CAUAUAUG 
 .       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Star sequence

Gja-Mir-1805-P4_5p*
mirBase accessionNone
Sequence 
0- AGUUGUAGUCUUUCAAACAGA -21
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Mature sequence

Gja-Mir-1805-P4_3p
mirBase accessionNone
Sequence 
39- UGUAUUGGAACACUACAGCUCC -61
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