Mir
Gene
DB
2.1
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86 microRNA genes of family MIR-31
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
▲
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Gja-Mir-31-P12
None
MIR-31
GGCAAGA
None
None
NW_015164669.1
1784561
1784619
+
G. japonicus
Bilateria
Unknown
1
Tni-Mir-31
None
MIR-31
GGCAAGA
None
None
Un_random
12278863
12278922
-
Bilateria
Bilateria
Unknown
1
Bpl-Mir-31
None
MIR-31
GGCAAGA
None
None
QEOQ01000345.1
929582
929639
+
Bilateria
Bilateria
No
1
Lpo-Mir-31-P13
None
MIR-31
GGCAAGA
None
None
NW_013665962.1
603790
603849
+
L. polyphemus
Bilateria
Unknown
1
Bla-Mir-31
None
MIR-31
GGCAAGA
None
None
Sc0000399
174416
174477
+
Bilateria
Bilateria
No
1
Bge-Mir-31
None
MIR-31
GGCAAGA
None
None
KZ614513.1
1183518
1183577
+
Bilateria
Bilateria
No
1
Efe-Mir-31
None
MIR-31
GGCAAGA
None
None
Efet.01.174306
5298
5359
+
Bilateria
Bilateria
No
1
1
Ete-Mir-31
None
MIR-31
GGCAAGA
None
None
JH980317
14279606
14279664
-
Bilateria
Bilateria
No
1
1
Lpo-Mir-31-P14
None
MIR-31
GGCAAGA
None
None
NW_013666545.1
334431
334488
+
L. polyphemus
Bilateria
Unknown
1
Mal-Mir-31
None
MIR-31
GGCAAGA
None
None
KV885014.1
317072
317131
+
Bilateria
Bilateria
No
1
Sha-Mir-31
None
MIR-31
GGCAAGA
None
None
GL842851.1
1681
1739
+
Bilateria
Bilateria
No
1
Lan-Mir-31-P6
None
MIR-31
GGCAAGA
None
None
LFEI01001401
4745
4804
+
L. anatina
Bilateria
Unknown
1
1
Lpo-Mir-31-P15
None
MIR-31
GGCAAGA
None
None
NW_013665624.1
176533
176592
+
L. polyphemus
Bilateria
Unknown
1
Pfl-Mir-31
None
MIR-31
GGCAAGA
None
None
LD342794.1
648341
648399
-
Bilateria
Bilateria
Unknown
1
Dma-Mir-31
None
MIR-31
GGCAAGA
None
None
NC_046175.1
12368730
12368791
-
Bilateria
Bilateria
No
Cgi-Mir-31
None
MIR-31
GGCAAGA
None
None
scaffold211
287343
287398
-
Bilateria
Bilateria
No
1
Lan-Mir-31-P7
None
MIR-31
GGCAAGA
None
None
LFEI01000149
78473
78532
-
L. anatina
Bilateria
Unknown
1
1
Lpo-Mir-31-P16
None
MIR-31
GGCAAGA
None
None
NW_013674433.1
14547
14606
+
L. polyphemus
Bilateria
Unknown
1
Sto-Mir-31
None
MIR-31
GGCAAGA
None
None
BFAA01001118.1
548365
548422
-
Bilateria
Bilateria
Yes
1
1
Isc-Mir-31
None
MIR-31
GGCAAGA
None
None
DS657582
482
543
+
Bilateria
Bilateria
Unknown
1
1
Npo-Mir-31
None
MIR-31
GGCAAGA
None
None
JACATO010001526.1
8601
8658
+
Bilateria
Bilateria
Unknown
1
1
Spt-Mir-31
None
MIR-31
GGCAAGA
None
None
QEPC01007029.1
122371
122429
+
Bilateria
Bilateria
Unknown
1
Loc-Mir-31-P8
None
MIR-31
GGCAAGA
None
None
LG4
45815911
45815970
+
L. oculatus
Bilateria
No
1
Xla-Mir-31-P17
None
MIR-31
GGCAAGA
None
None
NC_030724.1
118648966
118649024
-
X. laevis
Bilateria
No
1
Cmi-Mir-31
None
MIR-31
GGCAAGA
None
None
KI635929.1
1945683
1945740
+
Bilateria
Bilateria
Yes
1
1
Xbo-Mir-31
None
MIR-31
GGCAAGA
None
None
3C-assembly_contig_1893
936263
936322
+
Bilateria
Bilateria
No
1
Esc-Mir-31
None
MIR-31
GGCAAGA
None
None
Esc-Mir-31_pre_SRIE01056511.1:577766-577909
44
101
-
Bilateria
Bilateria
No
1
Loc-Mir-31-P9
None
MIR-31
GGCAAGA
None
None
LG4
59481960
59482019
+
L. oculatus
Bilateria
No
Mun-Mir-31
None
MIR-31
GGCAAGA
None
None
31_LR594633.1:281890332-281890474
43
101
-
Bilateria
Bilateria
Unknown
1
1
Xla-Mir-31-P18
None
MIR-31
GGCAAGA
None
None
NC_030725.1
98082247
98082304
-
X. laevis
Bilateria
Unknown
1
Ebu-Mir-31
None
MIR-31
GGCAAGA
None
None
FYBX02009555.1
311839
311894
+
Bilateria
Bilateria
Unknown
1
Obi-Mir-31
None
MIR-31
GGCAAGA
None
None
KQ420998
42911
42968
+
Bilateria
Bilateria
No
1
Gja-Mir-31-P10
None
MIR-31
GGCAAGA
None
None
NW_015164226.1
388838
388896
-
G. japonicus
Bilateria
No
1
Lch-Mir-31
None
MIR-31
GGCAAGA
None
None
JH128150.1
522982
523040
-
Bilateria
Bilateria
Unknown
1
1
Hme-Mir-31
None
MIR-31
GGCAAGA
None
None
FASA01202097.1
1291
1349
+
Bilateria
Bilateria
Unknown
1
Ovu-Mir-31
None
MIR-31
GGCAAGA
None
None
RXHP01072362.1
30367
30424
+
Bilateria
Bilateria
No
1
Gja-Mir-31-P11
None
MIR-31
GGCAAGA
None
None
NW_015201646.1
532
590
+
G. japonicus
Bilateria
Unknown
1
Cel-Mir-31
cel-mir-72
MIR-31
GGCAAGA
MIMAT0000044
MIMAT0020318
chrII
2452854
2452919
+
Bilateria
Bilateria
No
Hsa-Mir-31
hsa-mir-31
MIR-31
GGCAAGA
MIMAT0000089
MIMAT0004504
chr9
21512120
21512178
-
Bilateria
Bilateria
No
1
1
Dme-Mir-31-P2
dme-mir-31b
MIR-31
GGCAAGA
MIMAT0000389
MIMAT0020825
X
8993317
8993418
-
Drosophila
Bilateria
No
Dme-Mir-31-P1
dme-mir-31a
MIR-31
GGCAAGA
MIMAT0000400
MIMAT0020834
2R
17783806
17783873
-
Drosophila
Bilateria
No
1
Mmu-Mir-31
mmu-mir-31
MIR-31
GGCAAGA
MIMAT0000538
MIMAT0004634
chr4
88910577
88910635
-
Bilateria
Bilateria
No
1
Cbr-Mir-31
cbr-mir-72
MIR-31
GGCAGAU
MIMAT0000694
None
II
14785990
14786080
-
Bilateria
Bilateria
No
Rno-Mir-31
rno-mir-31a
MIR-31
GGCAAGA
MIMAT0000810
MIMAT0017102
chr5
107206542
107206600
+
Bilateria
Bilateria
No
1
1
Gga-Mir-31
gga-mir-31
MIR-31
GGCAAGA
MIMAT0001189
MIMAT0026549
Z
78732018
78732076
-
Bilateria
Bilateria
No
1
Mml-Mir-31
mml-mir-31
MIR-31
GGCAAGA
MIMAT0002379
MIMAT0026577
chr15
62389954
62390012
+
Bilateria
Bilateria
No
1
1
Dre-Mir-31
dre-mir-31
MIR-31
GGCAAGA
MIMAT0003347
None
chr7
73263755
73263815
-
Bilateria
Bilateria
No
1
Bta-Mir-31
bta-mir-31
MIR-31
GGCAAGA
MIMAT0003548
None
NC_037335.1
22502386
22502444
+
Bilateria
Bilateria
No
1
1
Xtr-Mir-31
xtr-mir-31a
MIR-31
GGCAAGA
MIMAT0003679
None
chr1
108909690
108909748
-
Bilateria
Bilateria
Unknown
1
Sme-Mir-31-P19
sme-mir-31a
MIR-31
GGCAAGA
MIMAT0003979
MIMAT0012104
NNSW01000098_dd_Smes_g4_98
1507690
1507758
-
S. mediterranea
Bilateria
No
1
Sme-Mir-31-P20
sme-mir-31b-1
MIR-31
GGCAAGA
MIMAT0003980
MIMAT0011413
NNSW01000043_dd_Smes_g4_43
2461898
2461958
-
S. mediterranea
Bilateria
Unknown
1
Mdo-Mir-31
mdo-mir-31
MIR-31
GGCAAGA
MIMAT0004094
MIMAT0026653
6
35734645
35734703
-
Bilateria
Bilateria
No
1
Cin-Mir-31
cin-mir-31
MIR-31
GGCAAGA
MIMAT0006092
None
HT000111.1
89204
89265
-
Bilateria
Bilateria
No
1
1
Cfa-Mir-31
cfa-mir-31
MIR-31
GGCAAGA
MIMAT0006599
None
chr11
40904438
40904496
-
Bilateria
Bilateria
No
1
Oan-Mir-31
oan-mir-31
MIR-31
GGCAAGA
MIMAT0007111
MIMAT0007112
NC_041750.1
18353075
18353133
+
Bilateria
Bilateria
No
1
Tca-Mir-31
tca-mir-31
MIR-31
GGCAAGA
MIMAT0008362
MIMAT0019106
LG7
5938429
5938486
+
Bilateria
Bilateria
No
1
Dan-Mir-31-P2
dan-mir-31b
MIR-31
GGCAAGA
MIMAT0008469
None
scaffold_13047
712447
712538
-
Drosophila
Bilateria
No
Dan-Mir-31-P1
dan-mir-31a
MIR-31
GGCAAGA
MIMAT0008477
None
scaffold_13266
10515624
10515691
+
Drosophila
Bilateria
No
1
Dmo-Mir-31-P2
dmo-mir-31b
MIR-31
GGCAAGA
MIMAT0008639
None
scaffold_6473
5711164
5711265
+
Drosophila
Bilateria
Unknown
1
Dmo-Mir-31-P1
dmo-mir-31a
MIR-31
GGCAAGA
MIMAT0008677
None
scaffold_6496
11065485
11065551
+
Drosophila
Bilateria
No
1
Dsi-Mir-31-P2
dsi-mir-31b
MIR-31
GGCAAGA
MIMAT0008878
None
X
8424731
8424832
-
Drosophila
Bilateria
No
Dsi-Mir-31-P1
dsi-mir-31a
MIR-31
GGCAAGA
MIMAT0008886
None
2R
14317360
14317427
-
Drosophila
Bilateria
No
1
Dya-Mir-31-P1
dya-mir-31a
MIR-31
GGCAAGA
MIMAT0009103
None
2R
15512035
15512102
+
Drosophila
Bilateria
No
1
Dya-Mir-31-P2
dya-mir-31b
MIR-31
GGCAAGA
MIMAT0009104
None
X
12425708
12425809
+
Drosophila
Bilateria
No
Bfl-Mir-31
bfl-mir-31
MIR-31
GGCAAGA
MIMAT0009473
MIMAT0019141
NC_049993.1
300554
300614
-
Bilateria
Bilateria
No
Cte-Mir-31
cte-mir-31
MIR-31
GGCAAGA
MIMAT0009515
None
CAPTEscaffold_43
86484
86544
-
Bilateria
Bilateria
Unknown
1
Lgi-Mir-31
lgi-mir-31
MIR-31
GGCAAGA
MIMAT0009566
None
LOTGIsca_62
866087
866148
-
Bilateria
Bilateria
Unknown
1
Sko-Mir-31
sko-mir-31
MIR-31
GGCAAGA
MIMAT0009614
None
NW_003132358.1
76906
76966
+
Bilateria
Bilateria
Unknown
1
Spu-Mir-31
spu-mir-31
MIR-31
GGCAAGA
MIMAT0009657
None
AAGJ06000003.1
38236646
38236708
-
Bilateria
Bilateria
No
1
Dpu-Mir-31
dpu-mir-31
MIR-31
GGCAAGA
MIMAT0012659
None
gnl_ti_814293389_AZSH327271
39
100
-
Bilateria
Bilateria
No
Aae-Mir-31
aae-mir-31
MIR-31
GGCAAGA
MIMAT0014276
None
supercont1.636
483222
483279
-
Bilateria
Bilateria
No
1
1
Tgu-Mir-31
tgu-mir-31
MIR-31
GGCAAGA
MIMAT0014615
None
Z
40389641
40389699
+
Bilateria
Bilateria
Unknown
1
Asu-Mir-31
asu-mir-72
MIR-31
GGCAAGA
MIMAT0021468
MIMAT0021469
Scaffold618
63636
63697
+
Bilateria
Bilateria
No
Aca-Mir-31
aca-mir-31
MIR-31
GGCAAGA
MIMAT0021930
MIMAT0021931
2
61607441
61607499
+
Bilateria
Bilateria
No
1
Pmi-Mir-31-P5a
pmi-mir-31-3
MIR-31
GGCAAGA
MIMAT0032147
None
JH770732.1
22547
22607
+
P. miniata
Bilateria
No
1
Pmi-Mir-31-P5b
pmi-mir-31-3
MIR-31
GGCAAGA
MIMAT0032147
None
JH770732.1
22547
22607
+
P. miniata
Bilateria
No
1
Pmi-Mir-31-P3
pmi-mir-31-2
MIR-31
GGCAAGA
MIMAT0032147
None
JH770732.1
21164
21227
+
P. miniata
Bilateria
No
1
1
Pmi-Mir-31-P4
pmi-mir-31-1
MIR-31
GGCAAGA
MIMAT0032147
None
JH770732.1
21556
21616
+
P. miniata
Bilateria
No
Cpi-Mir-31
cpi-mir-31
MIR-31
GGCAAGA
MIMAT0037685
MIMAT0037686
JH584648
133182
133240
-
Bilateria
Bilateria
No
1
Ami-Mir-31
ami-mir-31
MIR-31
GGCAAGA
MIMAT0038088
MIMAT0038089
NW_017714378.1
656460
656518
+
Bilateria
Bilateria
No
1
Cli-Mir-31
cli-mir-31
MIR-31
GGCAAGA
MIMAT0038460
MIMAT0038461
scaffold476
622320
622378
+
Bilateria
Bilateria
No
1
Pbv-Mir-31
pbv-mir-31
MIR-31
GGCAAGA
MIMAT0038880
None
KE958157.1
9910
9969
-
Bilateria
Bilateria
Unknown
Gmo-Mir-31
gmo-mir-31
MIR-31
GGCAAGA
MIMAT0044100
None
GeneScaffold_1111
103251
103306
-
Bilateria
Bilateria
No
1
1
Cpo-Mir-31
cpo-mir-31
MIR-31
GGCAAGA
MIMAT0046914
MIMAT0046915
scaffold_2
600471
600529
-
Bilateria
Bilateria
No
1
Dno-Mir-31
dno-mir-31
MIR-31
GGCAAGA
MIMAT0047567
MIMAT0047568
JH566723
525341
525399
-
Bilateria
Bilateria
No
1
1
Ocu-Mir-31
ocu-mir-31
MIR-31
GGCAAGA
MIMAT0048161
MIMAT0048162
chr1
32242014
32242072
+
Bilateria
Bilateria
No
1
1
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