MirGeneDB ID | Dya-Mir-31-P1 |
Family name |
MIR-31 (all species) |
Seed |
GGCAAGA |
Species |
Fruit fly (Drosophila yakuba) |
MiRBase ID |
dya-mir-31a
|
Paralogues |
Dya-Mir-31-P2
|
Orthologues |
Aae-Mir-31
Aca-Mir-31
Ami-Mir-31
Asu-Mir-31
Bfl-Mir-31
Bge-Mir-31
Bla-Mir-31
Bpl-Mir-31
Bta-Mir-31
Cbr-Mir-31
Cel-Mir-31
Cfa-Mir-31
Cgi-Mir-31
Cin-Mir-31
Cli-Mir-31
Cmi-Mir-31
Cpi-Mir-31
Cpo-Mir-31
Cte-Mir-31
Dan-Mir-31-P1
Dma-Mir-31
Dme-Mir-31-P1
Dmo-Mir-31-P1
Dno-Mir-31
Dpu-Mir-31
Dre-Mir-31
Dsi-Mir-31-P1
Ebu-Mir-31
Efe-Mir-31
Esc-Mir-31
Ete-Mir-31
Gga-Mir-31
Gmo-Mir-31
Hme-Mir-31
Hsa-Mir-31
Isc-Mir-31
Lch-Mir-31
Lgi-Mir-31
Mal-Mir-31
Mdo-Mir-31
Mml-Mir-31
Mmu-Mir-31
Mun-Mir-31
Npo-Mir-31
Oan-Mir-31
Obi-Mir-31
Ocu-Mir-31
Ovu-Mir-31
Pbv-Mir-31
Pfl-Mir-31
Rno-Mir-31
Sha-Mir-31
Sko-Mir-31
Spt-Mir-31
Spu-Mir-31
Sto-Mir-31
Tca-Mir-31
Tgu-Mir-31
Tni-Mir-31
Xbo-Mir-31
Xtr-Mir-31
|
Node of Origin (locus) |
Drosophila
|
Node of Origin (family) |
Bilateria
|
Genome context (Drosophila_yakuba.dyak_caf1.dna.toplevel) |
2R: 15512035-15512102 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CUCGAUCGUAUAGCACCUCUGUUGGUAAAUUGGCAAGAUGUCGGCAUAGCUGACGUUGAAAAGCGAUUUUGAAGAUCGCUAUGCUGCAUCUAGUCAGUUGUUCAAUGGAACACUCAGCGAGAUCGAAC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CUCGAUCGUAUAGCACC--| UA A U UGACGUUGAAAAG
UCUGUUGG AAUUGGC AGAUG CGGCAUAGC \
AGGUAACU UUGACUG UCUAC GUCGUAUCG C
CAAGCUAGAGCGACUCACA^ UG A - CUAGAAGUUUUAG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dya-Mir-31-P1_5p |
mirBase accession | MIMAT0009103 |
Sequence |
0- UGGCAAGAUGUCGGCAUAGCUGA -23
Get sequence
|
Star sequence |
Dya-Mir-31-P1_3p* |
mirBase accession | None |
Sequence |
46- CGCUAUGCUGCAUCUAGUCAGU -68
Get sequence
|