MirGeneDB 2.1

33 microRNA genes with seed CUACAGU
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Aca-Mir-139 aca-mir-139 MIR-139 CUACAGU MIMAT0021762 MIMAT0021763 GL343695.1 186505 186563 - Gnathostomata Gnathostomata No
Ami-Mir-139 ami-mir-139 MIR-139 CUACAGU MIMAT0038158 MIMAT0038159 NW_017713116.1 33815 33873 + Gnathostomata Gnathostomata No
Bta-Mir-139 bta-mir-139 MIR-139 CUACAGU MIMAT0003788 None NC_037342.1 52174696 52174754 - Gnathostomata Gnathostomata No 1
Cfa-Mir-139 cfa-mir-139 MIR-139 CUACAGU None MIMAT0006645 chr21 25597024 25597082 + Gnathostomata Gnathostomata No 1
Cli-Mir-139 cli-mir-139 MIR-139 CUACAGU MIMAT0038525 MIMAT0038526 scaffold1323 18345 18403 + Gnathostomata Gnathostomata No 1 1
Cmi-Mir-139 None MIR-139 CUACAGU None None KI637794.1 117 174 - Gnathostomata Gnathostomata No 1
Cpi-Mir-139 cpi-mir-139 MIR-139 CUACAGU MIMAT0037762 MIMAT0037763 JH584598 2587189 2587247 + Gnathostomata Gnathostomata No
Cpo-Mir-139 cpo-mir-139 MIR-139 CUACAGU MIMAT0047002 MIMAT0047003 scaffold_103 2790723 2790781 + Gnathostomata Gnathostomata No 1
Dno-Mir-139 dno-mir-139 MIR-139 CUACAGU MIMAT0047651 MIMAT0047652 JH579338 404462 404520 - Gnathostomata Gnathostomata No 1
Dre-Mir-139 dre-mir-139 MIR-139 CUACAGU MIMAT0003349 MIMAT0032008 LKPD01049450.1 531 590 - Gnathostomata Gnathostomata No 1
Ete-Mir-139 None MIR-139 CUACAGU None None JH980327 1412159 1412217 - Gnathostomata Gnathostomata No 1
Gja-Mir-139 None MIR-139 CUACAGU None None NW_015176525.1 108396 108454 - Gnathostomata Gnathostomata Unknown
Gmo-Mir-139 None MIR-139 CUACAGU None None contig476824 43 104 - Gnathostomata Gnathostomata No 1
Hsa-Mir-139 hsa-mir-139 MIR-139 CUACAGU MIMAT0000250 MIMAT0004552 chr11 72615066 72615124 - Gnathostomata Gnathostomata No 1 1
Lch-Mir-139 None MIR-139 CUACAGU None None JH127329.1 94314 94372 - Gnathostomata Gnathostomata Unknown
Loc-Mir-139 None MIR-139 CUACAGU None None LG3 12274670 12274728 - Gnathostomata Gnathostomata No 1
Mal-Mir-139 None MIR-139 CUACAGU None None KV884890.1 279639 279700 + Gnathostomata Gnathostomata No 1 1
Mdo-Mir-139 mdo-mir-139 MIR-139 CUACAGU MIMAT0012744 MIMAT0026936 4 347282331 347282389 + Gnathostomata Gnathostomata No 1 1
Mml-Mir-139 mml-mir-139 MIR-139 CUACAGU MIMAT0006195 MIMAT0006196 chr14 64577063 64577121 - Gnathostomata Gnathostomata No 1 1
Mmu-Mir-139 mmu-mir-139 MIR-139 CUACAGU MIMAT0000656 MIMAT0004662 chr7 101475382 101475440 + Gnathostomata Gnathostomata No 1
Mun-Mir-139 None MIR-139 CUACAGU None None 139_LR594635.1:16720146-16720405 101 160 + Gnathostomata Gnathostomata Unknown
Oan-Mir-139 oan-mir-139 MIR-139 CUACAGU MIMAT0006904 MIMAT0006905 NC_041729.1 140872749 140872807 - Gnathostomata Gnathostomata No 1
Ocu-Mir-139 ocu-mir-139 MIR-139 CUACAGU MIMAT0048239 MIMAT0048240 chr1 143799359 143799417 + Gnathostomata Gnathostomata No 1
Pbv-Mir-139 pbv-mir-139 MIR-139 CUACAGU MIMAT0038951 MIMAT0038952 KE954243.1 261592 261650 - Gnathostomata Gnathostomata No 1 1
Rno-Mir-139 rno-mir-139 MIR-139 CUACAGU MIMAT0000845 MIMAT0004735 chr1 166589551 166589609 + Gnathostomata Gnathostomata No 1
Sha-Mir-139 sha-mir-139 MIR-139 CUACAGU MIMAT0022803 None GL849732.1 511096 511154 + Gnathostomata Gnathostomata No 1 1
Spt-Mir-139 None MIR-139 CUACAGU None None QEPC01001076.1 1155763 1155821 - Gnathostomata Gnathostomata Unknown
Sto-Mir-139 None MIR-139 CUACAGU None None BFAA01014933.1 12442 12501 + Gnathostomata Gnathostomata Unknown 1
Tgu-Mir-139 tgu-mir-139 MIR-139 CUACAGU MIMAT0014500 MIMAT0014626 1 4315039 4315097 + Gnathostomata Gnathostomata No 1
Tni-Mir-139 None MIR-139 CUACAGU None None Un_random 82311596 82311657 - Gnathostomata Gnathostomata No
Xtr-Mir-139 xtr-mir-139 MIR-139 CUACAGU MIMAT0003600 None chr2 170077882 170077940 - Gnathostomata Gnathostomata No
Xla-Mir-139-P1 None MIR-139 CUACAGU None None NW_016786261.1 15 75 + X. laevis Gnathostomata No
Xla-Mir-139-P2 None MIR-139 CUACAGU None None NC_030727.1 157598776 157598836 - X. laevis Gnathostomata No

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