MirGeneDB 3.0

39 microRNA genes of family MIR-139

						Sort by genome coordinates								Motifs
MirGeneDB ID ▲	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	Iso­miR	3' NTU	UG	UGUG	CNNC
Aca-Mir-139	aca-mir-139	MIR-139	CUACAGU	MIMAT0021762	MIMAT0021763	GL343695.1	186505	186563	-	Gnathostomata	Gnathostomata		No
Ami-Mir-139	ami-mir-139	MIR-139	CUACAGU	MIMAT0038158	MIMAT0038159	NW_017713116.1	33815	33873	+	Gnathostomata	Gnathostomata		No
Bta-Mir-139	bta-mir-139	MIR-139	CUACAGU	MIMAT0003788	None	NC_037342.1	52174696	52174754	-	Gnathostomata	Gnathostomata		No		1
Cfa-Mir-139	cfa-mir-139	MIR-139	CUACAGU	None	MIMAT0006645	chr21	25597024	25597082	+	Gnathostomata	Gnathostomata		No		1
Cja-Mir-139	None	MIR-139	CUACAGU	None	None	CM021925.1	65053661	65053719	+	Gnathostomata	Gnathostomata		Unknown	1	1
Cli-Mir-139	cli-mir-139	MIR-139	CUACAGU	MIMAT0038525	MIMAT0038526	scaffold1323	18345	18403	+	Gnathostomata	Gnathostomata		No		1	1
Cmi-Mir-139	None	MIR-139	CUACAGU	None	None	KI637794.1	117	174	-	Gnathostomata	Gnathostomata		No	1
Cpi-Mir-139	cpi-mir-139	MIR-139	CUACAGU	MIMAT0037762	MIMAT0037763	JH584598	2587189	2587247	+	Gnathostomata	Gnathostomata		No
Cpo-Mir-139	cpo-mir-139	MIR-139	CUACAGU	MIMAT0047002	MIMAT0047003	scaffold_103	2790723	2790781	+	Gnathostomata	Gnathostomata		No		1
Dno-Mir-139	dno-mir-139	MIR-139	CUACAGU	MIMAT0047651	MIMAT0047652	JH579338	404462	404520	-	Gnathostomata	Gnathostomata		No		1
Dre-Mir-139	dre-mir-139	MIR-139	CUACAGU	MIMAT0003349	MIMAT0032008	LKPD01049450.1	531	590	-	Gnathostomata	Gnathostomata		No	1
Eca-Mir-139	eca-mir-139	MIR-139	CUACAGU	MIMAT0012983	MIMAT0012984	CM009154.1	73259104	73259162	+	Gnathostomata	Gnathostomata		No		1
Ete-Mir-139	None	MIR-139	CUACAGU	None	None	JH980327	1412159	1412217	-	Gnathostomata	Gnathostomata		No		1
Gja-Mir-139	None	MIR-139	CUACAGU	None	None	NW_015176525.1	108396	108454	-	Gnathostomata	Gnathostomata		Unknown
Gmo-Mir-139	None	MIR-139	CUACAGU	None	None	contig476824	43	104	-	Gnathostomata	Gnathostomata		No			1
Hsa-Mir-139	hsa-mir-139	MIR-139	CUACAGU	MIMAT0000250	MIMAT0004552	chr11	72615066	72615124	-	Gnathostomata	Gnathostomata		No	1	1
Laf-Mir-139	None	MIR-139	CUACAGU	None	None	GL010106.1	7156385	7156443	+	Gnathostomata	Gnathostomata		No		1
Lch-Mir-139	None	MIR-139	CUACAGU	None	None	JH127329.1	94314	94372	-	Gnathostomata	Gnathostomata		Unknown
Loc-Mir-139	None	MIR-139	CUACAGU	None	None	LG3	12274670	12274728	-	Gnathostomata	Gnathostomata		No	1
Mal-Mir-139	None	MIR-139	CUACAGU	None	None	KV884890.1	279639	279700	+	Gnathostomata	Gnathostomata		No	1		1
Mdo-Mir-139	mdo-mir-139	MIR-139	CUACAGU	MIMAT0012744	MIMAT0026936	4	347282331	347282389	+	Gnathostomata	Gnathostomata		No	1	1
Mml-Mir-139	mml-mir-139	MIR-139	CUACAGU	MIMAT0006195	MIMAT0006196	CM014349.1	65608842	65608900	-	Gnathostomata	Gnathostomata		No	1	1
Mmr-Mir-139	None	MIR-139	CUACAGU	None	None	CM007665.1	57556817	57556875	-	Gnathostomata	Gnathostomata		No		1
Mmu-Mir-139	mmu-mir-139	MIR-139	CUACAGU	MIMAT0000656	MIMAT0004662	chr7	101475382	101475440	+	Gnathostomata	Gnathostomata		No		1
Mun-Mir-139	None	MIR-139	CUACAGU	None	None	LR594635.1	16720246	16720305	+	Gnathostomata	Gnathostomata		Unknown
Neu-Mir-139	None	MIR-139	CUACAGU	None	None	CM051817.1	133263870	133263928	+	Gnathostomata	Gnathostomata		No	1	1
Oan-Mir-139	oan-mir-139	MIR-139	CUACAGU	MIMAT0006904	MIMAT0006905	NC_041729.1	140872749	140872807	-	Gnathostomata	Gnathostomata		No			1
Ocu-Mir-139	ocu-mir-139	MIR-139	CUACAGU	MIMAT0048239	MIMAT0048240	chr1	143799359	143799417	+	Gnathostomata	Gnathostomata		No		1
Pab-Mir-139	None	MIR-139	CUACAGU	None	None	CM054688.2	74654314	74654372	-	Gnathostomata	Gnathostomata		No	1	1
Pbv-Mir-139	pbv-mir-139	MIR-139	CUACAGU	MIMAT0038951	MIMAT0038952	KE954243.1	261592	261650	-	Gnathostomata	Gnathostomata		No	1		1
Rno-Mir-139	rno-mir-139	MIR-139	CUACAGU	MIMAT0000845	MIMAT0004735	chr1	166589551	166589609	+	Gnathostomata	Gnathostomata		Yes		1
Sha-Mir-139	sha-mir-139	MIR-139	CUACAGU	MIMAT0022803	None	GL849732.1	511096	511154	+	Gnathostomata	Gnathostomata		Yes	1	1
Spt-Mir-139	None	MIR-139	CUACAGU	None	None	QEPC01001076.1	1155763	1155821	-	Gnathostomata	Gnathostomata		Unknown
Sto-Mir-139	None	MIR-139	CUACAGU	None	None	BFAA01014933.1	12442	12501	+	Gnathostomata	Gnathostomata		Unknown	1
Tgu-Mir-139	tgu-mir-139	MIR-139	CUACAGU	MIMAT0014500	MIMAT0014626	1	4315039	4315097	+	Gnathostomata	Gnathostomata		No		1
Tni-Mir-139	None	MIR-139	CUACAGU	None	None	Un_random	82311596	82311657	-	Gnathostomata	Gnathostomata		No
Xtr-Mir-139	xtr-mir-139	MIR-139	CUACAGU	MIMAT0003600	None	chr2	170077882	170077940	-	Gnathostomata	Gnathostomata		No
Xla-Mir-139-P1	None	MIR-139	CUACAGU	None	None	NW_016786261.1	15	75	+	X. laevis	Gnathostomata		No
Xla-Mir-139-P2	None	MIR-139	CUACAGU	None	None	NC_030727.1	157598776	157598836	-	X. laevis	Gnathostomata		No

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all