MirGeneDB 3.0

22 microRNA genes with seed UAGCUCU
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Xla-Mir-458-P2 None MIR-458 UAGCUCU None None NC_030729.1 100488717 100488774 - X. laevis Osteichthyes No 1
Xla-Mir-458-P1 None MIR-458 UAGCUCU None None NC_030728.1 37654349 37654406 + X. laevis Osteichthyes No 1
Gga-Mir-458-as gga-mir-458b MIR-458 UAGCUCU MIMAT0025830 MIMAT0025831 13 8954786 8954843 + Neognathae Osteichthyes No 1
Cli-Mir-458-as None MIR-458 UAGCUCU None None scaffold636 126030 126087 - Neognathae Osteichthyes No 1
Xtr-Mir-458 None MIR-458 UAGCUCU None None chr3 34925495 34925552 + Osteichthyes Osteichthyes No 1
Tni-Mir-458 tni-mir-458 MIR-458 UAGCUCU None MIMAT0002937 1_random 761745 761801 - Osteichthyes Osteichthyes No 1
Tgu-Mir-458 tgu-mir-458 MIR-458 UAGCUCU MIMAT0026962 MIMAT0014466 13 16941156 16941213 + Osteichthyes Osteichthyes No 1
Spt-Mir-458 None MIR-458 UAGCUCU None None QEPC01015368.1 1559631 1559688 + Osteichthyes Osteichthyes Unknown 1
Pbv-Mir-458 pbv-mir-458 MIR-458 UAGCUCU None MIMAT0039061 KE959752.1 25068 25125 + Osteichthyes Osteichthyes No 1
Oan-Mir-458 oan-mir-458 MIR-458 UAGCUCU MIMAT0007009 MIMAT0007010 NC_041749.1 17802192 17802249 + Osteichthyes Osteichthyes No 1
Mun-Mir-458 None MIR-458 UAGCUCU None None LR594639.1 181940700 181940757 + Osteichthyes Osteichthyes No 1
Mal-Mir-458 None MIR-458 UAGCUCU None None KV884709.1 2790586 2790644 + Osteichthyes Osteichthyes No 1
Loc-Mir-458 None MIR-458 UAGCUCU None None LG6 37681651 37681708 - Osteichthyes Osteichthyes No 1
Lch-Mir-458 None MIR-458 UAGCUCU None None JH126722.1 216349 216406 + Osteichthyes Osteichthyes Unknown 1
Gmo-Mir-458 gmo-mir-458 MIR-458 UAGCUCU MIMAT0044010 MIMAT0044011 contig148200 34 92 - Osteichthyes Osteichthyes No 1 1
Gja-Mir-458 None MIR-458 UAGCUCU None None NW_015177083.1 13651 13708 + Osteichthyes Osteichthyes No 1
Gga-Mir-458 gga-mir-458a MIR-458 UAGCUCU MIMAT0007745 MIMAT0007746 13 8954784 8954841 - Osteichthyes Osteichthyes No 1
Dre-Mir-458 dre-mir-458 MIR-458 UAGCUCU MIMAT0032005 MIMAT0001885 chr14 25159138 25159195 - Osteichthyes Osteichthyes No 1
Cpi-Mir-458 cpi-mir-458 MIR-458 UAGCUCU MIMAT0037890 MIMAT0037891 JH584689 4003125 4003182 - Osteichthyes Osteichthyes No 1
Cli-Mir-458 cli-mir-458 MIR-458 UAGCUCU MIMAT0038649 MIMAT0038650 scaffold636 126032 126089 + Osteichthyes Osteichthyes No 1
Ami-Mir-458 ami-mir-458 MIR-458 UAGCUCU None MIMAT0038290 NW_017713851.1 12830884 12830941 - Osteichthyes Osteichthyes No 1
Aca-Mir-458 aca-mir-458 MIR-458 UAGCUCU None MIMAT0021969 2 121791169 121791226 - Osteichthyes Osteichthyes No 1

(red - mature/co-mature, blue - star)

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