MirGeneDB

Gene name

Pfl-Mir-8

Family name MIR-8 (all species)
MiRBase ID
Paralogues
Orthologues Aca-Mir-8-P1a  Aca-Mir-8-P2a  Aca-Mir-8-P3a  Ami-Mir-8-P1a  Ami-Mir-8-P2a  Ami-Mir-8-P3a  Asu-Mir-8  Bfl-Mir-8-P1  Bfl-Mir-8-P2  Bfl-Mir-8-P3-v1  Bfl-Mir-8-P3-v2  Bta-Mir-8-P1a  Bta-Mir-8-P1b  Bta-Mir-8-P2a  Bta-Mir-8-P2b  Bta-Mir-8-P3a  Cel-Mir-8  Cfa-Mir-8-P1a  Cfa-Mir-8-P1b  Cfa-Mir-8-P2a  Cfa-Mir-8-P2b  Cfa-Mir-8-P3a  Cgi-Mir-8  Cli-Mir-8-P1a  Cli-Mir-8-P2a  Cli-Mir-8-P3a  Cpi-Mir-8-P1a  Cpi-Mir-8-P2a  Cpi-Mir-8-P3a  Cpo-Mir-8-P1a  Cpo-Mir-8-P1b  Cpo-Mir-8-P2a  Cpo-Mir-8-P2b  Cpo-Mir-8-P3a  Cte-Mir-8  Dme-Mir-8  Dno-Mir-8-P1a  Dno-Mir-8-P1b  Dno-Mir-8-P2a  Dno-Mir-8-P3a  Dpu-Mir-8  Dre-Mir-8-P1a  Dre-Mir-8-P1b  Dre-Mir-8-P2a  Dre-Mir-8-P2b  Dre-Mir-8-P3a  Dre-Mir-8-P3b  Efe-Mir-8-P4  Efe-Mir-8-P5  Efe-Mir-8-P6  Ete-Mir-8-P1a  Ete-Mir-8-P1b  Ete-Mir-8-P2a  Ete-Mir-8-P2b  Ete-Mir-8-P3a  Gga-Mir-8-P1a  Gga-Mir-8-P2a  Gga-Mir-8-P3a  Hsa-Mir-8-P1a  Hsa-Mir-8-P1b  Hsa-Mir-8-P2a  Hsa-Mir-8-P2b  Hsa-Mir-8-P3a  Isc-Mir-8  Lgi-Mir-8  Mdo-Mir-8-P1a  Mdo-Mir-8-P1b  Mdo-Mir-8-P2a  Mdo-Mir-8-P2b  Mdo-Mir-8-P3a  Mml-Mir-8-P1a  Mml-Mir-8-P1b  Mml-Mir-8-P2a  Mml-Mir-8-P2b  Mml-Mir-8-P3a  Mmu-Mir-8-P1a  Mmu-Mir-8-P1b  Mmu-Mir-8-P2a  Mmu-Mir-8-P2b  Mmu-Mir-8-P3a  Ocu-Mir-8-P1a  Ocu-Mir-8-P1b  Ocu-Mir-8-P2a  Ocu-Mir-8-P2b  Ocu-Mir-8-P3a  Pmi-Mir-8  Rno-Mir-8-P1a  Rno-Mir-8-P1b  Rno-Mir-8-P2a  Rno-Mir-8-P2b  Rno-Mir-8-P3a  Sha-Mir-8-P1a  Sha-Mir-8-P1b  Sha-Mir-8-P2a  Sha-Mir-8-P2b  Sha-Mir-8-P3a  Sko-Mir-8  Spu-Mir-8  Tca-Mir-8  Xtr-Mir-8-P1a  Xtr-Mir-8-P2a  Xtr-Mir-8-P3a 
Node of Origin (gene) Bilateria
Node of Origin (family) Bilateria
Genome context
(Pfl)
LD342655.1: 279389-279449 [-]
Precursor
(pre-Mir +30nt flank)
CUUGGGUUGAUGUGGUGUGAAUUCAAUUGACAUCUUACUCGACAGCAUUAGACUUGUUAUGCAUUCUCUAAUACUGUCUGGUAAUGAUGUUAAUAGGUUUCACCAUCUCAUCAAUUAUUAA
Get precursor sequence
Structure
        10          20        30         40        50         
CUUGGGUUGAUGUGGUG--    UU A         -|    C     C      CUUGUU 
                   UGAA  C AUUGACAUC UUACU GACAG AUUAGA      A
                   ACUU  G UAAUUGUAG AAUGG CUGUC UAAUCU      U
AAUUAUUAACUACUCUACC    UG A         U^    U     A      CUUACG 
 .       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Pt
Star sequence

Pfl-Mir-8_5p*

MirBase accessionNone
Sequence
0- CAUCUUACUCGACAGCAUUAGA -22
Get sequence
Mature sequence

Pfl-Mir-8_3p

MirBase accessionNone
Sequence
38- UAAUACUGUCUGGUAAUGAUGUU -61
Get sequence
Seed sequenceAAUACUG