MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-8-P3a

Family name MIR-8 (all species)
Seed AAUACUG
Species Human (Homo sapiens)
MiRBase ID hsa-mir-429
Paralogues Hsa-Mir-8-P1a  Hsa-Mir-8-P1b  Hsa-Mir-8-P2a  Hsa-Mir-8-P2b 
Orthologues Aae-Mir-8  Aca-Mir-8-P3a  Ami-Mir-8-P3a  Asu-Mir-8  Bfl-Mir-8-P3  Bge-Mir-8  Bla-Mir-8-P3  Bpl-Mir-8  Bta-Mir-8-P3a  Cbr-Mir-8  Cel-Mir-8  Cfa-Mir-8-P3a  Cgi-Mir-8  Cli-Mir-8-P3a  Cmi-Mir-8-P3a  Cpi-Mir-8-P3a  Cpo-Mir-8-P3a  Csc-Mir-8  Cte-Mir-8  Dan-Mir-8  Dma-Mir-8  Dme-Mir-8  Dmo-Mir-8  Dno-Mir-8-P3a  Dpu-Mir-8  Dre-Mir-8-P3a  Dsi-Mir-8  Dya-Mir-8  Esc-Mir-8  Ete-Mir-8-P3a  Gga-Mir-8-P3a  Gja-Mir-8-P3a  Gmo-Mir-8-P3a  Hme-Mir-8  Isc-Mir-8  Lan-Mir-8  Lch-Mir-8-P3a  Lgi-Mir-8  Loc-Mir-8-P3a  Mal-Mir-8-P3a  Mdo-Mir-8-P3a  Mml-Mir-8-P3a  Mmu-Mir-8-P3a  Mun-Mir-8-P3a  Npo-Mir-8  Oan-Mir-8-P3a  Obi-Mir-8  Ocu-Mir-8-P3a  Ovu-Mir-8  Pbv-Mir-8-P3a  Pfl-Mir-8  Pmi-Mir-8  Rno-Mir-8-P3a  Sha-Mir-8-P3a  Sko-Mir-8  Spt-Mir-8-P3a  Spu-Mir-8  Sto-Mir-8-P3a  Tca-Mir-8  Tni-Mir-8-P3a  Xla-Mir-8-P3a1  Xla-Mir-8-P3a2  Xtr-Mir-8-P3a 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(hg38)
chr1: 1169020-1169076 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-8-P3a)
Mir-8-P1a chr1: 1167124-1167182 [+] UCSC Ensembl
Mir-8-P2a chr1: 1167878-1167938 [+] UCSC Ensembl
Mir-8-P3a chr1: 1169020-1169076 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCACCCACACCACCGCCGGCCGAUGGGCGUCUUACCAGACAUGGUUAGACCUGGCCCUCUGUCUAAUACUGUCUGGUAAAACCGUCCAUCCGCUGCCUGAUCACCGUUAGAGGAG
Get precursor sequence
Structure
        10          20        30         40        50       
GGCCACCCACACCACCGC--    C        UC-|         UG      CCUGG 
                    CGGC GAUGGGCG   UUACCAGACA  GUUAGA     C
                    GUCG CUACCUGC   AAUGGUCUGU  UAAUCU     C
GAGGAGAUUGCCACUAGUCC    C        CAA^         CA      GUCUC 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
CommentThere is a second Drosha cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
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Star sequence

Hsa-Mir-8-P3a_5p*

mirBase accessionNone
Sequence
0- GUCUUACCAGACAUGGUUAGA -21
Get sequence
Mature sequence

Hsa-Mir-8-P3a_3p

mirBase accessionMIMAT0001536
Sequence
35- UAAUACUGUCUGGUAAAACCGU -57
Get sequence
Proposed targets microrna.org: MIMAT0001536
TargetScanVert: hsa-miR-429
TargetMiner: hsa-miR-429
miRDB: MIMAT0001536