MirGeneDB 2.1
MirGeneDB ID

Mml-Mir-8-P1b

Family name MIR-8 (all species)
Seed AAUACUG
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-200c
Paralogues Mml-Mir-8-P1a  Mml-Mir-8-P2a  Mml-Mir-8-P2b  Mml-Mir-8-P3a 
Orthologues Aae-Mir-8  Asu-Mir-8  Bfl-Mir-8-P1-v1  Bfl-Mir-8-P1-v2  Bge-Mir-8  Bla-Mir-8-P1  Bpl-Mir-8  Bta-Mir-8-P1b  Cbr-Mir-8  Cel-Mir-8  Cfa-Mir-8-P1b  Cgi-Mir-8  Cin-Mir-8-P1  Cpo-Mir-8-P1b  Csc-Mir-8  Cte-Mir-8  Dan-Mir-8  Dma-Mir-8  Dme-Mir-8  Dmo-Mir-8  Dpu-Mir-8  Dre-Mir-8-P1b  Dsi-Mir-8  Dya-Mir-8  Esc-Mir-8  Ete-Mir-8-P1b  Hme-Mir-8  Hsa-Mir-8-P1b  Isc-Mir-8  Lan-Mir-8  Lch-Mir-8-P1b  Lgi-Mir-8  Mdo-Mir-8-P1b  Mmu-Mir-8-P1b  Npo-Mir-8  Oan-Mir-8-P1b  Obi-Mir-8  Ocu-Mir-8-P1b  Ovu-Mir-8  Pfl-Mir-8  Pmi-Mir-8  Rno-Mir-8-P1b  Sha-Mir-8-P1b  Sko-Mir-8  Spu-Mir-8  Tca-Mir-8 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(rheMac8_trace)		 chr11: 7280481-7280542 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-8-P1b)		 Mir-8-P1b chr11: 7280481-7280542 [+] UCSC Ensembl
Mir-8-P2b chr11: 7280890-7280954 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCAAGGUGGGCGGGCUGGGUGGGGGCCCUCGUCUUACCCAGCAGUGUUUGGGUGCGGUUGGGAGUCUCUAAUACUGCCGGGUAAUGAUGGAGGCCCCCGUCCCUGUGUCAGCAACAUCCAU
Get precursor sequence
Structure
        10         20         30         40        50          
CCCAAGGUGGGCGGGCU-   -        CU    -|     A        U  GUGCGGU 
                  GGG UGGGGGCC  CGUC UUACCC GCAGUGUU GG       \
                  CCC GCCCCCGG  GUAG AAUGGG CGUCAUAA CU       U
UACCUACAACGACUGUGU   U        AG    U^     C        U  CUGAGGG 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-8-P1b_5p*
mirBase accessionMIMAT0026560
Sequence 
0- CGUCUUACCCAGCAGUGUUUGG -22
Get sequence
Proposed targets TargetScanVert: mml-miR-200c-5p
Mature sequence

Mml-Mir-8-P1b_3p
mirBase accessionMIMAT0002195
Sequence 
39- UAAUACUGCCGGGUAAUGAUGGA -62
Get sequence
Proposed targets TargetScanVert: mml-miR-200c-3p