MirGeneDB

83 Ptychodera flava microRNA genes
Sort by genome coordinates Motifs Tissue expression
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Gene name MiRBase ID Family 5p accession 3p accession Chromosome Start End Strand Node of origin (gene) Node of origin (family) 3' NTU  UG  UGUG CNNC Pt
Pfl-Let-7 None LET-7 None None LD349317.1 35634 35701 - Bilateria Bilateria Unknown 1
Pfl-Mir-1 None MIR-1 None None LD345073.1 123485 123547 + Bilateria Bilateria No
Pfl-Mir-7 None MIR-7 None None LD347705.1 18505 18566 - Bilateria Bilateria Unknown 1 1
Pfl-Mir-8 None MIR-8 None None LD342655.1 279389 279449 - Bilateria Bilateria No 1
Pfl-Mir-9-v1 None MIR-9 None None LD344854.1 129993 130052 + Bilateria Bilateria No 1 1
Pfl-Mir-9-v2 None MIR-9 None None LD344854.1 129993 130052 + Bilateria Bilateria No 1
Pfl-Mir-10-P1 None MIR-10 None None LD344867.1 476557 476616 + Bilateria Eumetazoa Unknown 1
Pfl-Mir-10-P2 None MIR-10 None None LD349317.1 44526 44584 - Bilateria Eumetazoa No 1
Pfl-Mir-10-P3 None MIR-10 None None LD350399.1 17402 17460 + Bilateria Eumetazoa No 1 1 1
Pfl-Mir-22-P1 None MIR-22 None None LD346721.1 581033 581090 - Bilateria Bilateria Unknown 1
Pfl-Mir-29-P1 None MIR-29 None None LD346879.1 81562 81623 + Bilateria Bilateria No 1 1
Pfl-Mir-29-P2 None MIR-29 None None LD346879.1 78304 78364 + Bilateria Bilateria No 1
Pfl-Mir-31 None MIR-31 None None LD342794.1 648341 648399 - Bilateria Bilateria Unknown 1
Pfl-Mir-33 None MIR-33 None None LD343728.1 540211 540271 - Bilateria Bilateria No 1
Pfl-Mir-34 None MIR-34 None None LD524815.1 31840 31898 - Bilateria Bilateria Unknown 1 1
Pfl-Mir-71 None MIR-71 None None LD353158.1 300398 300457 - Bilateria Bilateria Unknown 1
Pfl-Mir-92-o43 None MIR-92 None None LD343282.1 114848 114906 + P. flava Bilateria Unknown 1 1
Pfl-Mir-92-o44 None MIR-92 None None LD343282.1 115958 116021 + P. flava Bilateria No 1 1
Pfl-Mir-92-o45 None MIR-92 None None LD343282.1 96920 96979 + P. flava Bilateria No 1
Pfl-Mir-92-o46 None MIR-92 None None LD343282.1 115395 115459 + P. flava Bilateria No 1 1
Pfl-Mir-92-o47 None MIR-92 None None LD343282.1 115115 115177 + P. flava Bilateria No
Pfl-Mir-96-P1 None MIR-96 None None LD345584.1 198910 198968 - Bilateria Bilateria Unknown 1
Pfl-Mir-96-P2 None MIR-96 None None LD345584.1 198298 198362 - Bilateria Bilateria Unknown 1 1
Pfl-Mir-96-P3 None MIR-96 None None LD345584.1 199276 199339 - Bilateria Bilateria Unknown 1 1
Pfl-Mir-103 None MIR-103 None None LD346721.1 581831 581890 - Deuterostomia Deuterostomia Yes
Pfl-Mir-124 None MIR-124 None None LD355232.1 155525 155587 - Bilateria Bilateria No 1
Pfl-Mir-133-v1 None MIR-133 None None LD345073.1 192531 192590 + Bilateria Bilateria No 1
Pfl-Mir-133-v2 None MIR-133 None None LD345073.1 192531 192590 + Bilateria Bilateria No 1
Pfl-Mir-137-v1 None MIR-137 None None LD343696.1 352495 352552 - Bilateria Bilateria No 1
Pfl-Mir-137-v2 None MIR-137 None None LD343696.1 352495 352552 - Bilateria Bilateria No 1
Pfl-Mir-153 None MIR-153 None None LD348957.1 284194 284252 + Bilateria Bilateria No 1 1
Pfl-Mir-184 None MIR-184 None None LD343748.1 220101 220160 + Bilateria Bilateria No 1
Pfl-Mir-190 None MIR-190 None None LD356152.1 43344 43402 - Bilateria Bilateria Unknown 1
Pfl-Mir-193-P1c None MIR-193 None None LD349275.1 115030 115089 + Enteropneusta Bilateria No 1 1 1
Pfl-Mir-193-P1d None MIR-193 None None LD349275.1 115517 115576 + Enteropneusta Bilateria No 1 1
Pfl-Mir-193-P2 None MIR-193 None None LD349275.1 117222 117282 + Bilateria Bilateria No 1
Pfl-Mir-210 None MIR-210 None None LD350372.1 354057 354117 - Bilateria Bilateria No 1
Pfl-Mir-219 None MIR-219 None None LD345001.1 105047 105112 - Bilateria Bilateria Unknown 1 1
Pfl-Mir-242 None MIR-242 None None LD346879.1 366091 366150 + Bilateria Bilateria Unknown 1
Pfl-Mir-252-P1 None MIR-252 None None LD368470.1 41174 41234 + Bilateria Bilateria No 1 1
Pfl-Mir-252-P2 None MIR-252 None None LD368470.1 39994 40053 + Bilateria Bilateria Unknown 1
Pfl-Mir-278 None MIR-278 None None LD346721.1 447470 447531 - Bilateria Bilateria No 1 1 1
Pfl-Mir-281 None MIR-281 None None LD346606.1 193921 193982 - Bilateria Bilateria No 1
Pfl-Mir-315 None MIR-315 None None LD349104.1 101009 101069 - Bilateria Bilateria Unknown
Pfl-Mir-375 None MIR-375 None None LD344517.1 177550 177613 - Bilateria Bilateria Unknown 1 1 1
Pfl-Mir-2001 None MIR-2001 None None LD368470.1 38645 38714 + Bilateria Bilateria Unknown 1 1
Pfl-Mir-2006 None MIR-2006 None None LD527063.1 34000 34058 - Ambulacraria Ambulacraria No 1
Pfl-Mir-2007 None MIR-2007 None None LD354612.1 123309 123374 + Ambulacraria Ambulacraria No 1 1
Pfl-Mir-2008 None MIR-2008 None None LD526296.1 136777 136837 - Ambulacraria Ambulacraria No 1
Pfl-Mir-2009 None MIR-2009 None None LD355980.1 422987 423047 + Ambulacraria Ambulacraria No 1 1
Pfl-Mir-2011 None MIR-2011 None None LD346233.1 326914 326976 + Ambulacraria Ambulacraria No 1 1
Pfl-Mir-2012 None MIR-2012 None None LD344014.1 121392 121453 + Ambulacraria Ambulacraria Unknown
Pfl-Mir-4818-P1 None MIR-4818 None None LD345931.1 65685 65745 - Enteropneusta Hemichordata No 1 1 1
Pfl-Mir-4818-P2 None MIR-4818 None None LD345931.1 65041 65101 - Enteropneusta Hemichordata No 1 1
Pfl-Mir-4818-P4 None MIR-4818 None None LD345931.1 65538 65597 - Enteropneusta Hemichordata No 1
Pfl-Mir-4818-P5 None MIR-4818 None None LD345931.1 60244 60301 - Enteropneusta Hemichordata No 1
Pfl-Mir-4818-P6 None MIR-4818 None None LD345931.1 60006 60068 - Enteropneusta Hemichordata No 1 1 1
Pfl-Mir-4818-P7 None MIR-4818 None None LD345931.1 65230 65289 - Enteropneusta Hemichordata No 1 1
Pfl-Mir-4819 None MIR-4819 None None LD344947.1 75194 75252 + Enteropneusta Enteropneusta No
Pfl-Mir-4820 None MIR-4820 None None LD343718.1 81400 81463 + Enteropneusta Enteropneusta No 1 1
Pfl-Mir-4824 None MIR-4824 None None LD357736.1 49417 49479 - Enteropneusta Enteropneusta Unknown 1
Pfl-Mir-4825 None MIR-4825 None None LD362106.1 5121 5182 + Enteropneusta Enteropneusta Yes 1
Pfl-Mir-4826 None MIR-4826 None None LD343550.1 44743 44809 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4828-P1 None MIR-4828 None None LD343010.1 765739 765802 - Enteropneusta Hemichordata No 1 1
Pfl-Mir-4828-P2 None MIR-4828 None None LD343010.1 765387 765446 - Enteropneusta Hemichordata No 1 1 1
Pfl-Mir-4828-P3 None MIR-4828 None None LD343010.1 765581 765644 - Enteropneusta Hemichordata No 1 1
Pfl-Mir-4829-P1 None MIR-4829 None None LD533351.1 109846 109914 + Enteropneusta Hemichordata No 1
Pfl-Mir-4829-P2 None MIR-4829 None None LD533351.1 109641 109700 + Enteropneusta Hemichordata No 1
Pfl-Mir-4829-P3 None MIR-4829 None None LD533351.1 110032 110091 + Enteropneusta Hemichordata No 1
Pfl-Mir-4830-P5 None MIR-4830 None None LD353158.1 295072 295133 - P. flava Enteropneusta Unknown 1
Pfl-Mir-4830-P6 None MIR-4830 None None LD353158.1 294064 294125 - P. flava Enteropneusta Unknown
Pfl-Mir-4830-P7 None MIR-4830 None None LD353158.1 289927 289988 - P. flava Enteropneusta Unknown 1 1
Pfl-Mir-4830-P8 None MIR-4830 None None LD353158.1 289427 289486 - P. flava Enteropneusta No 1
Pfl-Mir-4831 None MIR-4831 None None LD352251.1 81024 81083 + Enteropneusta Enteropneusta No 1 1
Pfl-Mir-4834 None MIR-4834 None None LD346721.1 582412 582474 - Hemichordata Hemichordata No
Pfl-Mir-4835 None MIR-4835 None None LD349453.1 152990 153050 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4838 None MIR-4838 None None LD527542.1 213535 213594 + Enteropneusta Enteropneusta No 1
Pfl-Mir-4839 None MIR-4839 None None LD346064.1 153036 153094 - Enteropneusta Enteropneusta Unknown
Pfl-Mir-4841-P4a None MIR-4841 None None LD342650.1 153637 153694 - P. flava Enteropneusta Unknown 1 1 1
Pfl-Mir-4841-P4b None MIR-4841 None None LD342650.1 149483 149540 - P. flava Enteropneusta Unknown 1 1 1
Pfl-Novel-1 None PFL-NOVEL-1 None None LD348073.1 223086 223149 - P. flava P. flava No
Pfl-Novel-2 None PFL-NOVEL-2 None None LD353693.1 57013 57071 + P. flava P. flava No 1
Pfl-Novel-3 None PFL-NOVEL-3 None None LD361500.1 8168 8234 - P. flava P. flava No 1 1

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