MirGeneDB 3.0
MirGeneDB ID

Mml-Mir-506-P1d

Family name MIR-506 (all species)
Species Rhesus monkey (Macaca mulatta)
MiRBase ID
Paralogues Mml-Mir-506-P1a  Mml-Mir-506-P1b  Mml-Mir-506-P1c4  Mml-Mir-506-P1c5  Mml-Mir-506-P1c6  Mml-Mir-506-P1e  Mml-Mir-506-P2b  Mml-Mir-506-P3  Mml-Mir-506-P4  Mml-Mir-506-P5o1  Mml-Mir-506-P5o2  Mml-Mir-506-P5o3  Mml-Mir-506-P5o4a  Mml-Mir-506-P5o4b  Mml-Mir-506-P6a  Mml-Mir-506-P6b  Mml-Mir-506-P6c  Mml-Mir-506-P6d  Mml-Mir-506-P6e 
Orthologues Cfa-Mir-506-P1  Cja-Mir-506-P1d  Hsa-Mir-506-P1d  Laf-Mir-506  Pab-Mir-506-P1d  Rno-Mir-506-P1 
Node of Origin (locus) Simiiformes
Node of Origin (family) Eutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)		 CM014356.1: 143290733-143290793 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P1d)		 Mir-506-P5o3 CM014356.1: 143252920-143252977 [-] UCSC Ensembl
Mir-506-P5o2 CM014356.1: 143261882-143261939 [-] UCSC Ensembl
Mir-506-P5o1 CM014356.1: 143270447-143270504 [-] UCSC Ensembl
Mir-506-P4 CM014356.1: 143275369-143275425 [-] UCSC Ensembl
Mir-506-P2b CM014356.1: 143275695-143275752 [-] UCSC Ensembl
Mir-506-P3 CM014356.1: 143281565-143281622 [-] UCSC Ensembl
Mir-506-P1e CM014356.1: 143285603-143285660 [-] UCSC Ensembl
Mir-506-P1d CM014356.1: 143290733-143290793 [-] UCSC Ensembl
Mir-506-P1c5 CM014356.1: 143294073-143294130 [-] UCSC Ensembl
Mir-506-P1c4 CM014356.1: 143294958-143295015 [-] UCSC Ensembl
Mir-506-P1b CM014356.1: 143303098-143303155 [-] UCSC Ensembl
Mir-506-P1a CM014356.1: 143309725-143309782 [-] UCSC Ensembl
Seed GAUUGAA
Precursor
(pre-Mir +30nt flank)		 
CCAUCCUUAGACAUGCUGUCUGUGGUACCUUACUCGAGAGAGUAGCAAUCACAUAUGGUAAUCACAUAUGAUUGAAACCUCUACGAGUAGUGUAACGCAUGACAUAUGCAGCACAUGUAAU
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Structure
        10         20         30         40        50          
CCAUCCUUAGACAUGCU-   -    G   C       -|   A  AG      CAUAUGGU 
                  GUC UGUG UAC UUACUCG AGAG GU  CAAUCA        \
                  CAG ACGC AUG GAUGAGC UCUC CA  GUUAGU        A
UAAUGUACACGACGUAUA   U    A   U       A^   -  AA      AUACACUA 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-506-P1d_5p* (predicted)
mirBase accessionNone
Sequence 
0- UACUCGAGAGAGUAGCAAUCACA -23
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Mature sequence

Mml-Mir-506-P1d_3p
mirBase accessionNone
Sequence 
38- UGAUUGAAACCUCUACGAGUAGU -61
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