MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-506-P1d

Family name MIR-506 (all species)
Species Human (Homo sapiens)
MiRBase ID
Paralogues Hsa-Mir-506-P1a1  Hsa-Mir-506-P1a2  Hsa-Mir-506-P1a3  Hsa-Mir-506-P1b  Hsa-Mir-506-P1c1  Hsa-Mir-506-P1c2  Hsa-Mir-506-P1c3  Hsa-Mir-506-P1e  Hsa-Mir-506-P2b  Hsa-Mir-506-P3  Hsa-Mir-506-P4  Hsa-Mir-506-P5a1  Hsa-Mir-506-P5a2  Hsa-Mir-506-P5b  Hsa-Mir-506-P5c  Hsa-Mir-506-P6a  Hsa-Mir-506-P6b  Hsa-Mir-506-P6c  Hsa-Mir-506-P6d  Hsa-Mir-506-P6e 
Orthologues Cfa-Mir-506-P1  Cja-Mir-506-P1d  Laf-Mir-506  Mml-Mir-506-P1d  Pab-Mir-506-P1d  Rno-Mir-506-P1 
Node of Origin (locus) Simiiformes
Node of Origin (family) Eutheria
Genome context
(hg38)		 chrX: 147255308-147255368 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P1d)		 Mir-506-P5a2 chrX: 147213498-147213555 [-] UCSC Ensembl
Mir-506-P5a1 chrX: 147225860-147225917 [-] UCSC Ensembl
Mir-506-P4 chrX: 147230753-147230809 [-] UCSC Ensembl
Mir-506-P2b chrX: 147231002-147231059 [-] UCSC Ensembl
Mir-506-P3 chrX: 147236945-147237002 [-] UCSC Ensembl
Mir-506-P1e chrX: 147250161-147250218 [-] UCSC Ensembl
Mir-506-P1d chrX: 147255308-147255368 [-] UCSC Ensembl
Mir-506-P1c3 chrX: 147258774-147258831 [-] UCSC Ensembl
Mir-506-P1c2 chrX: 147259661-147259717 [-] UCSC Ensembl
Mir-506-P1c1 chrX: 147260549-147260606 [-] UCSC Ensembl
Mir-506-P1b chrX: 147272342-147272399 [-] UCSC Ensembl
Mir-506-P1a3 chrX: 147279266-147279323 [-] UCSC Ensembl
Mir-506-P1a1 chrX: 147281957-147282014 [-] UCSC Ensembl
Mir-506-P1a2 chrX: 147284655-147284712 [-] UCSC Ensembl
Seed GAUUGAA
Precursor
(pre-Mir +30nt flank)		 
CCAUCCUUAGACAUGCUGUCUGCGGGGCCUUACUCGAGAGAGUAGCAAUCACAUAUGGUAAUGACAUAUGAUUGAAACCUCUACGAGUGGUGUAACACGUGACAUAUGCAGCAUAUGUAAU
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Structure
        10         20          30         40        50          
CCAUCCUUAGACAUGCU-   U   GG--  C       -|   A  AG      CAUAUGGU 
                  GUC GCG    GC UUACUCG AGAG GU  CAAUCA        \
                  CAG UGC    UG GGUGAGC UCUC CA  GUUAGU        A
UAAUGUAUACGACGUAUA   -   ACAA  U       A^   -  AA      AUACAGUA 
 .       110        100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-506-P1d_5p*
mirBase accessionNone
Sequence 
0- UACUCGAGAGAGUAGCAAUCACA -23
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Mature sequence

Hsa-Mir-506-P1d_3p
mirBase accessionNone
Sequence 
38- UGAUUGAAACCUCUACGAGUGGU -61
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