MirGeneDB ID | Mml-Mir-506-P1c6 |
Family name |
MIR-506 (all species) |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
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Paralogues |
Mml-Mir-506-P1a
Mml-Mir-506-P1b
Mml-Mir-506-P1c4
Mml-Mir-506-P1c5
Mml-Mir-506-P1d
Mml-Mir-506-P1e
Mml-Mir-506-P2b
Mml-Mir-506-P3
Mml-Mir-506-P4
Mml-Mir-506-P5o1
Mml-Mir-506-P5o2
Mml-Mir-506-P5o3
Mml-Mir-506-P5o4a
Mml-Mir-506-P5o4b
Mml-Mir-506-P6a
Mml-Mir-506-P6b
Mml-Mir-506-P6c
Mml-Mir-506-P6d
Mml-Mir-506-P6e
|
Orthologues |
Cfa-Mir-506-P1
Cja-Mir-506-P1c
Laf-Mir-506
Rno-Mir-506-P1
|
Node of Origin (locus) |
M. mulatta
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
ref|NC_027913.1|:140965443-140965706: 100-157 [-]
UCSC
Ensembl
|
Seed |
GAUUGGU |
Precursor (pre-Mir +30nt flank) |
CCAUCCUCAGACAUGUUGUGUGUGGUACCCUACUGCAGGCAGUGGCAAUCAUGUGUAGUUAAAAAUGAUUGGUAUGUCUGUGGGUAGAGUAAUGCAUGACACAUGCAACAUACAUGAU
Get precursor sequence
|
Structure | 10 20 30 40 50
CCAUCCUCAGACAUGUU- - GG C -|UG G G GUGUA
GU GUGU UAC CUA C CAGGCA UG CAAUCAU G
CA UACG AUG GAU G GUCUGU AU GUUAGUA U
UAGUACAUACAACGUACA G UA A G^GU - G AAAAU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Star sequence |
Mml-Mir-506-P1c6_5p* (predicted) |
mirBase accession | None |
Sequence |
0- UACUGCAGGCAGUGGCAAUCAUG -23
Get sequence
|
Mature sequence |
Mml-Mir-506-P1c6_3p |
mirBase accession | None |
Sequence |
35- UGAUUGGUAUGUCUGUGGGUAGA -58
Get sequence
|