MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-137-P1

Family name MIR-137 (all species)
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-137-P1-v1  Loc-Mir-137-P3-v1 
Orthologues Aca-Mir-137-P1-v1  Aga-Mir-137  Agr-Mir-137  Ami-Mir-137-P1-v1  Asu-Mir-137  Ava-Mir-137  Bfl-Mir-137  Bko-Mir-137  Bpl-Mir-137  Bta-Mir-137-P1-v1  Cbr-Mir-137  Cel-Mir-137  Cfa-Mir-137-P1-v1  Cja-Mir-137-P1-v1  Cli-Mir-137-P1-v1  Cmi-Mir-137-P1  Cpi-Mir-137-P1-v1  Cte-Mir-137  Dan-Mir-137  Dgr-Mir-137  Dma-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dno-Mir-137-P1-v1  Dpu-Mir-137  Dre-Mir-137-P1a-v1  Dre-Mir-137-P1b-v1  Dsi-Mir-137  Dya-Mir-137  Eba-Mir-137  Ebu-Mir-137  Eca-Mir-137-P1  Esc-Mir-137  Ete-Mir-137-P1-v1  Gga-Mir-137-P1-v1  Gja-Mir-137-P1-v1  Gmo-Mir-137-P1b-v1  Gpa-Mir-137  Hme-Mir-137  Hru-Mir-137  Hsa-Mir-137-P1-v1  Isc-Mir-137  Laf-Mir-137-P1  Lan-Mir-137  Lch-Mir-137-P1  Lgi-Mir-137  Lhy-Mir-137  Llo-Mir-137  Mal-Mir-137-P1b-v1  Mdo-Mir-137-P1-v1  Mgi-Mir-137  Mml-Mir-137-P1-v1  Mmr-Mir-137-P1  Mmu-Mir-137-P1-v1  Mom-Mir-137  Mun-Mir-137-P1  Neu-Mir-137-P1  Oan-Mir-137-P1-v1  Obi-Mir-137  Ocu-Mir-137-P1-v1  Ofu-Mir-137  Pab-Mir-137-P1-v1  Pau-Mir-137  Pbv-Mir-137-P1-v1  Pca-Mir-137  Pdu-Mir-137  Pma-Mir-137-o1  Pve-Mir-137  Rno-Mir-137-P1-v1  Rph-Mir-137  Sha-Mir-137-P1-v1  Sko-Mir-137  Snu-Mir-137  Spt-Mir-137-P1  Spu-Mir-137  Sto-Mir-137-P1  Tgu-Mir-137-P1-v1  Tur-Mir-137  War-Mir-137  Xbo-Mir-137  Xla-Mir-137-P1  Xtr-Mir-137-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(LepOcu1)		 LG10: 14874509-14874569 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-137-P1-v2)		 Mir-137-P1-v2 LG10: 14874509-14874569 [-] Ensembl
Mir-137-P1-v1 LG10: 14874510-14874568 [-] Ensembl
Variant

Loc-Mir-137-P1-v2
Seed AUUGCUU
Precursor
(pre-Mir +30nt flank)		 
AUUGCUUCCUUCUUUAAGACUCUCUUCGGUGACGGGUAUUCUUGGGUGGAUAAUACGGAUUACGUUGUUAUUGCUUAAGAAUACGCGUAGUCGAGGAGAGUACAUCUUCAGCGACUUCAAG
Get precursor sequence
Structure
        10          20        30        40        50        60
AUUGCUUCCUUCUUUAAG--|          UG   G           UG A   UACGGA 
                    ACUCUCUUCGG  ACG GUAUUCUUGGG  G UAA      U
                    UGAGAGGAGCU  UGC CAUAAGAAUUC  U AUU      U
GAACUUCAGCGACUUCUACA^          GA   G           GU -   GUUGCA 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-137-P1-v2_5p*
mirBase accessionNone
Sequence 
0- GACGGGUAUUCUUGGGUGGAUAA -23
Get sequence
Mature sequence

Loc-Mir-137-P1-v2_3p
mirBase accessionNone
Sequence 
38- UAUUGCUUAAGAAUACGCGUAGU -61
Get sequence
Variant

Loc-Mir-137-P1-v1
Seed UAUUGCU
Precursor
(pre-Mir +30nt flank)		 
UUGCUUCCUUCUUUAAGACUCUCUUCGGUGACGGGUAUUCUUGGGUGGAUAAUACGGAUUACGUUGUUAUUGCUUAAGAAUACGCGUAGUCGAGGAGAGUACAUCUUCAGCGACUUCAA
Get precursor sequence
Structure
        10          20        30        40        50         
UUGCUUCCUUCUUUAAG--|          UG   G           UG A    ACGGA 
                   ACUCUCUUCGG  ACG GUAUUCUUGGG  G UAAU     U
                   UGAGAGGAGCU  UGC CAUAAGAAUUC  U AUUG     U
AACUUCAGCGACUUCUACA^          GA   G           GU -    UUGCA 
       110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-137-P1-v1_5p*
mirBase accessionNone
Sequence 
0- ACGGGUAUUCUUGGGUGGAUAAU -23
Get sequence
Mature sequence

Loc-Mir-137-P1-v1_3p
mirBase accessionNone
Sequence 
36- UUAUUGCUUAAGAAUACGCGUAG -59
Get sequence