MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-15-P1d

Family name MIR-15 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-15-P1a  Ete-Mir-15-P1b  Ete-Mir-15-P1c  Ete-Mir-15-P2a  Ete-Mir-15-P2b  Ete-Mir-15-P2c  Ete-Mir-15-P2d 
Orthologues Ami-Mir-15-P1d  Bta-Mir-15-P1d  Cfa-Mir-15-P1d  Cin-Mir-15-P1  Cja-Mir-15-P1d  Cpo-Mir-15-P1d  Dno-Mir-15-P1d  Dre-Mir-15-P1d  Eca-Mir-15-P1d  Hsa-Mir-15-P1d  Laf-Mir-15-P1d  Loc-Mir-15-P1d  Mdo-Mir-15-P1d  Mml-Mir-15-P1d  Mmr-Mir-15-P1d  Mmu-Mir-15-P1d  Neu-Mir-15-P1d  Oan-Mir-15-P1d  Ocu-Mir-15-P1d  Pab-Mir-15-P1d  Rno-Mir-15-P1d  Sha-Mir-15-P1d  Sto-Mir-15-P1d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(echTel2)		 JH980362: 486379-486440 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-15-P1d)		 Mir-15-P2d JH980362: 486030-486090 [-] UCSC
Mir-15-P1d JH980362: 486379-486440 [-] UCSC
Seed AGCAGCA
Precursor
(pre-Mir +30nt flank)		 
CUCUCAACCCACCCAGUCCUGCCCCCGCCCCAGCAGCACACUGUGGUUUGCACGGCAUUGUGGCCACGUCCAAACCACACUGUGGUGUUAGAGCGAGGGUGGGGGAGGCUCCGCUGAGGCCU
Get precursor sequence
Structure
        10          20        30        40        50        60
CUCUCAACCCACCCAGU--| UG   C   CCC    G    C         CACGGCAUU 
                   CC  CCC CGC   AGCA CACA UGUGGUUUG         G
                   GG  GGG GCG   UUGU GUGU ACACCAAAC         U
UCCGGAGUCGCCUCGGAGG^ GU   A   AGA    G    C         CUGCACCGG 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Ete-Mir-15-P1d_5p
mirBase accessionNone
Sequence 
0- CAGCAGCACACUGUGGUUUGCA -22
Get sequence
Star sequence

Ete-Mir-15-P1d_3p* (predicted)
mirBase accessionNone
Sequence 
40- CAAACCACACUGUGGUGUUAGA -62
Get sequence