MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-145

Family name MIR-145 (all species)
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues
Orthologues Aca-Mir-145  Ami-Mir-145  Bta-Mir-145  Cfa-Mir-145  Cja-Mir-145  Cli-Mir-145  Cmi-Mir-145  Cpi-Mir-145  Cpo-Mir-145  Dno-Mir-145  Dre-Mir-145  Eca-Mir-145  Ete-Mir-145  Gga-Mir-145  Gja-Mir-145  Gmo-Mir-145  Hsa-Mir-145  Laf-Mir-145  Lch-Mir-145  Loc-Mir-145  Mal-Mir-145  Mdo-Mir-145  Mml-Mir-145  Mmr-Mir-145  Mmu-Mir-145  Mun-Mir-145  Neu-Mir-145  Oan-Mir-145  Ocu-Mir-145  Pab-Mir-145  Pbv-Mir-145  Pma-Mir-145  Rno-Mir-145  Sha-Mir-145  Spt-Mir-145  Sto-Mir-145  Tgu-Mir-145  Xla-Mir-145-P1  Xla-Mir-145-P2  Xtr-Mir-145 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02000147.1: 4053748-4053806 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-145)		 Mir-145 FYBX02000147.1: 4053748-4053806 [-] UCSC Ensembl
Mir-143 FYBX02000147.1: 4053910-4053963 [-] UCSC Ensembl
Seed UCCAGUU
Precursor
(pre-Mir +30nt flank)		 
UCAUCGGUCUAGCGGCUGGGAUUGGCUGGGGUCCAGUUUUCCCAGGAUUCCCUGUUGUUAAUACCAAGGAUUCCUGGAAAGGCUGUCCCCAGACUCGCCCCUUCCCUGCAAUCACGUUG
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Structure
        10          20         30        40        50         
UCAUCGGUCUAGCGGCU--|  AUU  -      UC       C      U   CUGUUGU 
                   GGG   GG CUGGGG  CAGUUUU CCAGGA UCC       U
                   CCC   UC GACCCC  GUCGGAA GGUCCU AGG       A
GUUGCACUAACGUCCCUUC^  GC-  A      U-       A      U   AACCAUA 
       110       100         90         80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Ebu-Mir-145_5p
mirBase accessionNone
Sequence 
0- GUCCAGUUUUCCCAGGAUUCCCU -23
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Star sequence

Ebu-Mir-145_3p* (predicted)
mirBase accessionNone
Sequence 
37- GGAUUCCUGGAAAGGCUGUCCC -59
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