MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-362-P6

Family name MIR-362 (all species)
Seed AUGCACC
Species Cow (Bos taurus)
MiRBase ID bta-mir-502a-2
Paralogues Bta-Mir-362-P1  Bta-Mir-362-P2-v1  Bta-Mir-362-P2-v2  Bta-Mir-362-P2-v3  Bta-Mir-362-P4  Bta-Mir-362-P5 
Orthologues Ocu-Mir-362-P6 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037357.1: 87732068-87732125 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P6)
Mir-188-P2 NC_037357.1: 87724748-87724806 [+] UCSC Ensembl
Mir-188-P1 NC_037357.1: 87725070-87725129 [+] UCSC Ensembl
Mir-362-P6 NC_037357.1: 87732068-87732125 [+] UCSC Ensembl
Mir-362-P2-v1 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl
Mir-362-P2-v3 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl
Mir-362-P2-v2 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl
Mir-362-P1 NC_037357.1: 87736674-87736732 [+] UCSC Ensembl
Mir-362-P5 NC_037357.1: 87737938-87737999 [+] UCSC Ensembl
Mir-188-P3 NC_037357.1: 87740093-87740151 [+] UCSC Ensembl
Mir-362-P4 NC_037357.1: 87742037-87742095 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUAGUUUUCUGCUCUGUUCCCCUGUAUCCAAUCUUAAUGCCCAGAUGCAGGUACUGUCUCAGUGCAAUGCACCUGGGCAAGGAUUCACAGAAGAUAAGUGUCUUCUGCACAGAGAAG
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Structure
        10             20        30        40        50          
CCUAGUUUUCUGCUCUGU-----| CC    AUCC      AA       A    G-   CUGU 
                       UC  CUGU    AAUCUU  UGCCCAG UGCA  GUA    \
                       AG  GACA    UUAGGA  ACGGGUC ACGU  CGU    C
GAAGAGACACGUCUUCUGUGAAU^ AA    C---      --       C    AA   GACU 
      110       100        90             80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-362-P6_5p* (predicted)

mirBase accessionNone
Sequence
0- AAUCUUAAUGCCCAGAUGCAGGUA -24
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Mature sequence

Bta-Mir-362-P6_3p

mirBase accessionMIMAT0009338
Sequence
36- AAUGCACCUGGGCAAGGAUUCA -58
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Proposed targets TargetScanVert: bta-miR-502a