MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-362-P1

Family name MIR-362 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-502a-2
Paralogues Bta-Mir-362-P3a-v1  Bta-Mir-362-P3b-v1  Bta-Mir-362-P4  Bta-Mir-362-P6 
Orthologues Laf-Mir-362-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037357.1: 87732069-87732124 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P1-v1)		 Mir-188-P1 NC_037357.1: 87724748-87724806 [+] UCSC Ensembl
Mir-188-P2 NC_037357.1: 87725070-87725129 [+] UCSC Ensembl
Mir-362-P1-v1 NC_037357.1: 87732069-87732124 [+] UCSC Ensembl
Mir-362-P1-v2 NC_037357.1: 87732069-87732124 [+] UCSC Ensembl
Mir-362-P3a-v3 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl
Mir-362-P3a-v2 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl
Mir-362-P3a-v1 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl
Mir-362-P4 NC_037357.1: 87736674-87736732 [+] UCSC Ensembl
Mir-362-P3b-v1 NC_037357.1: 87737938-87737999 [+] UCSC Ensembl
Mir-362-P3b-v2 NC_037357.1: 87737938-87737999 [+] UCSC Ensembl
Mir-188-P3 NC_037357.1: 87740093-87740151 [+] UCSC Ensembl
Mir-362-P6 NC_037357.1: 87742037-87742096 [+] UCSC Ensembl
Variant

Bta-Mir-362-P1-v1
Seed AUGCACC
Precursor
(pre-Mir +30nt flank)		 
CUAGUUUUCUGCUCUGUUCCCCUGUAUCCAAUCUUAAUGCCCAGAUGCAGGUACUGUCUCAGUGCAAUGCACCUGGGCAAGGAUUCACAGAAGAUAAGUGUCUUCUGCACAGAGAA
Get precursor sequence
Structure
        10             20        30        40        50        
CUAGUUUUCUGCUCUGU-----| CC    AUCC      AA       A    GGUACUGU 
                      UC  CUGU    AAUCUU  UGCCCAG UGCA        C
                      AG  GACA    UUAGGA  ACGGGUC ACGU        U
AAGAGACACGUCUUCUGUGAAU^ AA    C---      --       C    AACGUGAC 
    110       100        90           80          70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-362-P1-v1_5p* (predicted)
mirBase accessionNone
Sequence 
0- AUCUUAAUGCCCAGAUGCAGGU -22
Get sequence
Mature sequence

Bta-Mir-362-P1-v1_3p
mirBase accessionMIMAT0009338
Sequence 
35- AAUGCACCUGGGCAAGGAUUC -56
Get sequence
Proposed targets TargetScanVert: bta-miR-502a
Variant

Bta-Mir-362-P1-v2
Seed UGCACCU
Precursor
(pre-Mir +30nt flank)		 
CUAGUUUUCUGCUCUGUUCCCCUGUAUCCAAUCUUAAUGCCCAGAUGCAGGUACUGUCUCAGUGCAAUGCACCUGGGCAAGGAUUCACAGAAGAUAAGUGUCUUCUGCACAGAGAA
Get precursor sequence
Structure
        10             20        30        40        50        
CUAGUUUUCUGCUCUGU-----| CC    AUCC      AA       A    GGUACUGU 
                      UC  CUGU    AAUCUU  UGCCCAG UGCA        C
                      AG  GACA    UUAGGA  ACGGGUC ACGU        U
AAGAGACACGUCUUCUGUGAAU^ AA    C---      --       C    AACGUGAC 
    110       100        90           80          70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-362-P1-v2_5p* (predicted)
mirBase accessionNone
Sequence 
0- AUCUUAAUGCCCAGAUGCAGGU -22
Get sequence
Mature sequence

Bta-Mir-362-P1-v2_3p
mirBase accessionMIMAT0009338
Sequence 
36- AUGCACCUGGGCAAGGAUUC -56
Get sequence
Proposed targets TargetScanVert: bta-miR-502a