MirGeneDB

MirGeneDB ID

Aca-Mir-137-P1-v2

Family name MIR-137 (all species)
Seed AUUGCUU
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-137a
Paralogues Aca-Mir-137-P1-v1  Aca-Mir-137-P2 
Orthologues Ami-Mir-137-P1-v1  Ami-Mir-137-P1-v2  Asu-Mir-137  Bfl-Mir-137  Bta-Mir-137-P1-v1  Bta-Mir-137-P1-v2  Cbr-Mir-137  Cel-Mir-137  Cfa-Mir-137-P1-v1  Cfa-Mir-137-P1-v2  Cgi-Mir-137  Cli-Mir-137-P1-v1  Cli-Mir-137-P1-v2  Cpi-Mir-137-P1-v1  Cpi-Mir-137-P1-v2  Cte-Mir-137  Dan-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dno-Mir-137-P1-v1  Dno-Mir-137-P1-v2  Dpu-Mir-137  Dre-Mir-137-P1a-v1  Dre-Mir-137-P1a-v2  Dre-Mir-137-P1b-v1  Dre-Mir-137-P1b-v2  Ete-Mir-137-P1-v1  Ete-Mir-137-P1-v2  Gga-Mir-137-P1-v1  Gga-Mir-137-P1-v2  Hme-Mir-137  Hsa-Mir-137-P1-v1  Hsa-Mir-137-P1-v2  Isc-Mir-137  Lan-Mir-137  Lgi-Mir-137  Mdo-Mir-137-P1-v1  Mdo-Mir-137-P1-v2  Mml-Mir-137-P1-v1  Mml-Mir-137-P1-v2  Mmu-Mir-137-P1-v1  Mmu-Mir-137-P1-v2  Oan-Mir-137-P1-v1  Oan-Mir-137-P1-v2  Ocu-Mir-137-P1-v1  Ocu-Mir-137-P1-v2  Rno-Mir-137-P1-v1  Rno-Mir-137-P1-v2  Sha-Mir-137-P1-v1  Sha-Mir-137-P1-v2  Sko-Mir-137  Spu-Mir-137  Sto-Mir-137-P1  Tgu-Mir-137-P1-v1  Tgu-Mir-137-P1-v2  Xtr-Mir-137-P1c  Xtr-Mir-137-P1d  Xtr-Mir-137-P1e 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(anoCar2)
4: 92342050-92342109 [-] UCSC Ensembl
Clustered MiRNAs
(< 10kb from Mir-137-P1-v2)
Mir-137-P1-v2 4: 92342050-92342109 [-] UCSC Ensembl
Mir-137-P1-v1 4: 92342051-92342109 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGGCAGCAGCUUCCUGACUCUCUUCGGUGACGGGUAUUCUUGGGUGGAUAAUACGGAUUACGUUGUUAUUGCUUAAGAAUACGCGUAGUCGAGGAGAGUACUCGCGGCAGGGCGGGUGG
Get precursor sequence
Structure
        10           20        30        40        50         
CCGGCAGCAGCUUCCUG---|          UG   G           UG A    ACGGA 
                    ACUCUCUUCGG  ACG GUAUUCUUGGG  G UAAU     U
                    UGAGAGGAGCU  UGC CAUAAGAAUUC  U AUUG     U
GGUGGGCGGGACGGCGCUCA^          GA   G           GU -    UUGCA 
.       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Sk To Wh
Star sequence

Aca-Mir-137-P1-v2_5p*

MirBase accessionNone
Sequence
0- ACGGGUAUUCUUGGGUGGAUAAU -23
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Mature sequence

Aca-Mir-137-P1-v2_3p

MirBase accessionMIMAT0021754
Sequence
37- UAUUGCUUAAGAAUACGCGUAGU -60
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