MirGeneDB 3.0
21 Danio rerio microRNA genes with seed GAGGUAG (all species)
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Br Br Em Ey Gu Gu He Li Li Ov Te
Dre-Let-7-P1b1 dre-let-7d-1 LET-7 GAGGUAG MIMAT0001762 MIMAT0031931 chr16 24881136 24881205 + Clupeocephala Bilateria No 1 1
Dre-Let-7-P1b2 dre-let-7d-2 LET-7 GAGGUAG MIMAT0001762 MIMAT0031931 chr19 9429867 9429936 + Clupeocephala Bilateria No 1 1
Dre-Let-7-P1c1 dre-let-7c-1 LET-7 GAGGUAG MIMAT0001761 MIMAT0031930 chr15 29795845 29795911 + Clupeocephala Bilateria No 1
Dre-Let-7-P1c2 dre-let-7c-2 LET-7 GAGGUAG MIMAT0001761 MIMAT0031930 chr10 38072088 38072154 - Clupeocephala Bilateria No 1
Dre-Let-7-P1d1 dre-let-7a-2 LET-7 GAGGUAG MIMAT0001759 None chr15 21437886 21437952 + Clupeocephala Bilateria No 1
Dre-Let-7-P1d2 dre-let-7a-4 LET-7 GAGGUAG MIMAT0001759 None chr5 29990466 29990532 + Clupeocephala Bilateria No 1
Dre-Let-7-P2a1a dre-let-7a-1 LET-7 GAGGUAG MIMAT0001759 None chr11 27503240 27503310 - Clupeocephala Bilateria Yes 1 1
Dre-Let-7-P2a2a dre-let-7a-3 LET-7 GAGGUAG MIMAT0001759 None chr4 18654173 18654244 - Clupeocephala Bilateria No 1
Dre-Let-7-P2a2b None LET-7 GAGGUAG None None chr25 2189978 2190049 + Clupeocephala Bilateria No 1
Dre-Let-7-P2a3a dre-let-7g-2 LET-7 GAGGUAG MIMAT0001765 None chr23 28536374 28536444 + Clupeocephala Bilateria Yes 1 1
Dre-Let-7-P2a3b dre-let-7g-1 LET-7 GAGGUAG MIMAT0001765 None chr23 18382469 18382538 - Clupeocephala Bilateria Yes 1 1
Dre-Let-7-P2a4a dre-let-7e LET-7 GAGGUAG None None chr23 5431431 5431503 - Clupeocephala Bilateria Yes 1
Dre-Let-7-P2a4b None LET-7 GAGGUAG None None chr6 54507105 54507176 - Clupeocephala Bilateria Yes 1
Dre-Let-7-P2b1a dre-let-7f LET-7 GAGGUAG MIMAT0001764 None chr11 27503037 27503113 - Clupeocephala Bilateria Yes
Dre-Let-7-P2b2a dre-let-7b LET-7 GAGGUAG MIMAT0001760 None chr4 18653156 18653231 - Clupeocephala Bilateria Yes 1
Dre-Let-7-P2b2b None LET-7 GAGGUAG None None chr25 2192692 2192767 + Clupeocephala Bilateria Yes 1
Dre-Let-7-P2b3a dre-let-7h LET-7 GAGGUAG MIMAT0001766 None chr23 28536683 28536763 + Clupeocephala Bilateria Yes 1
Dre-Let-7-P2b4a dre-let-7a-5 LET-7 GAGGUAG MIMAT0001759 None chr23 5431216 5431292 - Clupeocephala Bilateria Yes 1
Dre-Let-7-P2b4b dre-let-7a-6 LET-7 GAGGUAG MIMAT0001759 None chr6 54506483 54506558 - Clupeocephala Bilateria Yes 1 1
Dre-Let-7-P2c2b dre-let-7i LET-7 GAGGUAG MIMAT0001767 None chr25 1629663 1629739 - Clupeocephala Bilateria Yes 1
Dre-Let-7-P2c3 dre-let-7j LET-7 GAGGUAG MIMAT0003015 None chr6 41454794 41454872 + Gnathostomata Bilateria Yes 1 1

(red - mature/co-mature, blue - star)

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