Mir
Gene
DB
2.1
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54 microRNA genes with seed UAGCACC
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
▼
Tgu-Mir-29-P1d-v2
tgu-mir-29b-2
MIR-29
UAGCACC
MIMAT0014651
MIMAT0014601
26
1141829
1141890
+
Gnathostomata
Bilateria
No
1
Hsa-Mir-29-P1d-v2
hsa-mir-29b-2
MIR-29
UAGCACC
MIMAT0004515
MIMAT0000100
chr1
207802451
207802513
-
Gnathostomata
Bilateria
No
1
Ami-Mir-29-P1d-v2
ami-mir-29b-2
MIR-29
UAGCACC
MIMAT0038076
MIMAT0038075
NW_017713418.1
1060964
1061026
+
Gnathostomata
Bilateria
No
1
Mml-Mir-29-P1d-v2
mml-mir-29b-2
MIR-29
UAGCACC
MIMAT0031079
MIMAT0006168
chr1
158779726
158779788
+
Gnathostomata
Bilateria
No
1
Cpi-Mir-29-P1d-v2
cpi-mir-29b-2
MIR-29
UAGCACC
MIMAT0037673
MIMAT0037672
JH584931
90891
90953
-
Gnathostomata
Bilateria
No
1
Mmu-Mir-29-P1d-v2
mmu-mir-29b-2
MIR-29
UAGCACC
MIMAT0017063
MIMAT0000127
chr1
195037050
195037112
+
Gnathostomata
Bilateria
No
1
Aca-Mir-29-P1d-v2
aca-mir-29b-1
MIR-29
UAGCACC
None
MIMAT0021914
GL343255.1
1940196
1940258
+
Gnathostomata
Bilateria
No
1
Pbv-Mir-29-P1d-v2
pbv-mir-29b-1
MIR-29
UAGCACC
MIMAT0038868
MIMAT0038869
KE953855.1
171281
171343
+
Gnathostomata
Bilateria
No
1
Cpo-Mir-29-P1d-v2
cpo-mir-29b-2
MIR-29
UAGCACC
MIMAT0046900
MIMAT0046899
scaffold_12
15329414
15329476
+
Gnathostomata
Bilateria
No
1
Gja-Mir-29-P1d-v2
None
MIR-29
UAGCACC
None
None
NW_015176027.1
130054
130116
-
Gnathostomata
Bilateria
No
1
Ocu-Mir-29-P1d-v2
ocu-mir-29b-2
MIR-29
UAGCACC
MIMAT0048147
MIMAT0048146
chr16
64849792
64849854
+
Gnathostomata
Bilateria
No
1
Cfa-Mir-29-P1d-v2
cfa-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0006625
chr7
6651879
6651941
-
Gnathostomata
Bilateria
No
1
Dno-Mir-29-P1d-v2
dno-mir-29b-2
MIR-29
UAGCACC
MIMAT0047553
MIMAT0047552
JH570311
1652050
1652112
-
Gnathostomata
Bilateria
No
1
Mun-Mir-29-P1d-v2
None
MIR-29
UAGCACC
None
None
29-P1c-v1_LR594643.1:6972092-6972228
38
100
-
Gnathostomata
Bilateria
No
1
Ete-Mir-29-P1d-v2
None
MIR-29
UAGCACC
None
None
JH980299
34357262
34357324
-
Gnathostomata
Bilateria
No
1
Sha-Mir-29-P1d-v2
None
MIR-29
UAGCACC
None
None
GL856780.1
19652
19714
-
Gnathostomata
Bilateria
No
1
Mdo-Mir-29-P1d-v2
mdo-mir-29b-2
MIR-29
UAGCACC
MIMAT0031047
MIMAT0004163
2
114184522
114184584
-
Gnathostomata
Bilateria
No
1
Oan-Mir-29-P1d-v2
oan-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0006809
NC_041734.1
63785638
63785700
-
Gnathostomata
Bilateria
No
1
Gga-Mir-29-P1d-v2
gga-mir-29b-2
MIR-29
UAGCACC
MIMAT0031072
MIMAT0001097
26
2700164
2700225
-
Gnathostomata
Bilateria
No
1
Cli-Mir-29-P1d-v2
cli-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0038450
scaffold454
2208567
2208628
-
Gnathostomata
Bilateria
No
1
Rno-Mir-29-P1d5-v2
rno-mir-29b-3
MIR-29
UAGCACC
MIMAT0004717
MIMAT0000801
chr13
113782067
113782129
+
R. norvegicus
Bilateria
No
1
Rno-Mir-29-P1d6-v2
rno-mir-29b-3
MIR-29
UAGCACC
MIMAT0004717
MIMAT0000801
chr1
38238386
38238448
+
R. norvegicus
Bilateria
No
1
Bta-Mir-29-P1d7-v2
bta-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0003828
NC_037343.1
75660384
75660446
+
B. taurus
Bilateria
No
1
Bta-Mir-29-P1d8-v2
bta-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0003828
NC_037343.1
75577056
75577118
+
B. taurus
Bilateria
No
1
Cmi-Mir-29-P2a-v2
None
MIR-29
UAGCACC
None
None
KI635869.1
5937584
5937642
+
Gnathostomata
Bilateria
No
1
Tgu-Mir-29-P1b-v2
tgu-mir-29b-1
MIR-29
UAGCACC
MIMAT0031064
MIMAT0014601
1A
2242422
2242483
+
Gnathostomata
Bilateria
No
1
Hsa-Mir-29-P1b-v2
hsa-mir-29b-1
MIR-29
UAGCACC
MIMAT0004514
MIMAT0000100
chr7
130877468
130877529
-
Gnathostomata
Bilateria
No
1
Ami-Mir-29-P1b-v2
ami-mir-29b-1
MIR-29
UGGUUUC
MIMAT0038074
MIMAT0038075
NW_017709854.1
24298585
24298646
-
Gnathostomata
Bilateria
No
1
Mml-Mir-29-P1b-v2
mml-mir-29b-1
MIR-29
UAGCACC
MIMAT0026803
MIMAT0006168
chr3
157003744
157003805
-
Gnathostomata
Bilateria
No
1
Cpi-Mir-29-P1b-v2
cpi-mir-29b-1
MIR-29
UAGCACC
MIMAT0037671
MIMAT0037672
JH584592
6714641
6714702
-
Gnathostomata
Bilateria
No
1
Mmu-Mir-29-P1b-v2
mmu-mir-29b-1
MIR-29
UAGCACC
MIMAT0004523
MIMAT0000127
chr6
31063026
31063087
-
Gnathostomata
Bilateria
No
1
Aca-Mir-29-P1b-v2
aca-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0021914
5
1037469
1037530
-
Gnathostomata
Bilateria
No
1
Rno-Mir-29-P1b-v2
rno-mir-29b-1
MIR-29
UAGCACC
MIMAT0005445
MIMAT0000801
chr4
58344319
58344380
-
Gnathostomata
Bilateria
No
1
Pbv-Mir-29-P1b-v2
pbv-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0038869
KE956667.1
9680
9741
-
Gnathostomata
Bilateria
No
1
Cpo-Mir-29-P1b-v2
cpo-mir-29b-1
MIR-29
UAGCACC
MIMAT0046898
MIMAT0046899
scaffold_44
12025790
12025851
+
Gnathostomata
Bilateria
No
1
Gja-Mir-29-P1b-v2
None
MIR-29
UAGCACC
None
None
NW_015176039.1
73859
73920
-
Gnathostomata
Bilateria
No
1
Cfa-Mir-29-P1b-v2
cfa-mir-29b-1
MIR-29
UAGCACC
None
MIMAT0006625
chr14
6184459
6184520
+
Gnathostomata
Bilateria
No
1
Bta-Mir-29-P1b-v2
bta-mir-29b-1
MIR-29
UAGCACC
None
MIMAT0003828
NC_037331.1
94636851
94636912
-
Gnathostomata
Bilateria
No
1
Xtr-Mir-29-P1b-v2
xtr-mir-29d
MIR-29
UAGCACC
None
MIMAT0003572
chr3
75127549
75127610
-
Gnathostomata
Bilateria
No
1
Dno-Mir-29-P1b-v2
dno-mir-29b-1
MIR-29
UAGCACC
MIMAT0047551
MIMAT0047552
JH569928
229490
229551
-
Gnathostomata
Bilateria
No
1
Sha-Mir-29-P1b-v2
None
MIR-29
UAGCACC
None
None
GL861655.1
481578
481639
-
Gnathostomata
Bilateria
No
1
Mdo-Mir-29-P1b-v2
mdo-mir-29b-1
MIR-29
UAGCACC
MIMAT0026703
MIMAT0004163
8
190600830
190600891
-
Gnathostomata
Bilateria
No
1
Oan-Mir-29-P1b-v2
oan-mir-29b-1
MIR-29
UAGCACC
MIMAT0006808
MIMAT0006809
NC_041737.1
47607569
47607630
-
Gnathostomata
Bilateria
No
1
Gga-Mir-29-P1b-v2
gga-mir-29b-1
MIR-29
UAGCACC
MIMAT0026488
MIMAT0001097
1
4029396
4029457
+
Gnathostomata
Bilateria
No
1
Cli-Mir-29-P1b-v2
cli-mir-29b-1
MIR-29
UAGCACC
MIMAT0038449
MIMAT0038450
scaffold137
49406
49467
-
Gnathostomata
Bilateria
No
1
Loc-Mir-29-P1b-v2
None
MIR-29
UAGCACC
None
None
LG8
12632836
12632897
+
Gnathostomata
Bilateria
No
1
Mal-Mir-29-P1b1-v2
None
MIR-29
UAGCACC
None
None
KV884739.1
6343654
6343716
-
Clupeocephala
Bilateria
No
1
1
Dpu-Mir-29-P2h
None
MIR-29
UAGCACC
None
None
DAPPUscaffold_32
69280
69354
-
Pancrustacea
Bilateria
No
Loc-Mir-29-P2d-v2
None
MIR-29
UAGCACC
None
None
LG3
30969986
30970043
+
Gnathostomata
Bilateria
No
Mal-Mir-29-P1d2-v2
None
MIR-29
UAGCACC
None
None
KV884882.1
159241
159302
-
Clupeocephala
Bilateria
No
1
Ocu-Mir-29-P1b-v2
ocu-mir-29b-1
MIR-29
UAGCACC
MIMAT0048145
MIMAT0048146
chr7
9515810
9515871
-
Gnathostomata
Bilateria
No
Ete-Mir-29-P1b-v2
None
MIR-29
UAGCACC
None
None
JH980321
23616622
23616683
-
Gnathostomata
Bilateria
No
Mal-Mir-29-P2b1-v2
None
MIR-29
UAGCACC
None
None
KV884739.1
6343485
6343545
-
Clupeocephala
Bilateria
No
Mal-Mir-29-P1b2-v2
None
MIR-29
UAGCACC
None
None
KV884695.1
2058999
2059059
-
Clupeocephala
Bilateria
No
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