MirGeneDB

22 microRNA genes with seed CCACAGG
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Aca-Mir-140-v1 aca-mir-140 MIR-140 CCACAGG MIMAT0021765 MIMAT0021766 GL343643.1 205834 205895 + Vertebrata Vertebrata No 1
Ami-Mir-140-v1 ami-mir-140 MIR-140 CCACAGG MIMAT0038160 MIMAT0038161 JH731391 1204640 1204701 - Vertebrata Vertebrata No
Bta-Mir-140-v1 bta-mir-140 MIR-140 CCACAGG None MIMAT0003789 chr18 37088153 37088214 + Vertebrata Vertebrata No 1
Cfa-Mir-140-v1 cfa-mir-140 MIR-140 CCACAGG None MIMAT0006689 chr5 79814255 79814316 - Vertebrata Vertebrata No 1
Cli-Mir-140-v1 cli-mir-140 MIR-140 CCACAGG MIMAT0038527 MIMAT0038528 scaffold123 5480472 5480533 - Vertebrata Vertebrata No 1
Cpi-Mir-140-v1 cpi-mir-140 MIR-140 CCACAGG MIMAT0037764 MIMAT0037765 JH584945 517644 517705 - Vertebrata Vertebrata No 1
Cpo-Mir-140-v1 cpo-mir-140 MIR-140 CCACAGG MIMAT0047004 MIMAT0047005 scaffold_22 6810958 6811019 - Vertebrata Vertebrata No 1
Dno-Mir-140-v1 dno-mir-140 MIR-140 CCACAGG MIMAT0047653 MIMAT0047654 JH569970 120638 120699 - Vertebrata Vertebrata No 1
Dre-Mir-140-v1 dre-mir-140 MIR-140 CCACAGG MIMAT0001836 MIMAT0003159 chr25 34791384 34791445 + Vertebrata Vertebrata No 1
Ete-Mir-140-v1 None MIR-140 CCACAGG None None JH980312 15985822 15985883 - Vertebrata Vertebrata No 1
Gga-Mir-140-v1 gga-mir-140 MIR-140 CCACAGG MIMAT0001159 MIMAT0003722 11 19310321 19310382 + Vertebrata Vertebrata No 1
Hsa-Mir-140-v1 hsa-mir-140 MIR-140 CCACAGG MIMAT0000431 MIMAT0004597 chr16 69933103 69933164 + Vertebrata Vertebrata No 1
Mdo-Mir-140-v1 mdo-mir-140 MIR-140 CCACAGG MIMAT0012745 MIMAT0026937 1 699870962 699871023 + Vertebrata Vertebrata No
Mml-Mir-140-v1 mml-mir-140 MIR-140 CCACAGG MIMAT0006197 MIMAT0006198 chr20 54375584 54375645 + Vertebrata Vertebrata No 1
Mmu-Mir-140-v1 mmu-mir-140 MIR-140 CCACAGG MIMAT0000151 MIMAT0000152 chr8 107551249 107551310 + Vertebrata Vertebrata No 1
Oan-Mir-140-v1 oan-mir-140 MIR-140 CCACAGG MIMAT0006812 MIMAT0006813 NC_041738.1 39776980 39777041 - Vertebrata Vertebrata No
Ocu-Mir-140-v1 ocu-mir-140 MIR-140 CCACAGG MIMAT0048241 MIMAT0048242 chr5 25337165 25337226 + Vertebrata Vertebrata No 1
Rno-Mir-140-v1 rno-mir-140 MIR-140 CCACAGG MIMAT0000573 MIMAT0000574 chr19 39608972 39609033 + Vertebrata Vertebrata No 1
Sha-Mir-140-v1 sha-mir-140 MIR-140 CCACAGG None MIMAT0022778 GL834769.1 1909560 1909621 + Vertebrata Vertebrata No
Sto-Mir-140-v1 None MIR-140 CCACAGG None None BFAA01000092.1 252505 252566 + Vertebrata Vertebrata No
Tgu-Mir-140-v1 tgu-mir-140 MIR-140 CCACAGG MIMAT0014557 MIMAT0014642 11 11805169 11805230 + Vertebrata Vertebrata No 1
Xtr-Mir-140-v1 xtr-mir-140 MIR-140 CCACAGG MIMAT0003601 None KB021653 50914954 50915015 + Vertebrata Vertebrata No 1

Get sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all