MirGeneDB 3.0

22 microRNA genes with node of origin D. melanogaster subgroup
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Dme-Mir-303 dme-mir-303 MIR-303 AGGUUUC MIMAT0000388 MIMAT0020824 X 4366184 4366240 - D. melanogaster subgroup D. melanogaster subgroup No 1
Dsi-Mir-303 dsi-mir-303 MIR-303 UGGCAUU MIMAT0012516 MIMAT0037362 X 3955015 3955071 - D. melanogaster subgroup D. melanogaster subgroup No 1 1
Dya-Mir-303 None MIR-303 AUUUACC None None X 4177759 4177818 + D. melanogaster subgroup D. melanogaster subgroup No 1
Dme-Mir-966 dme-mir-966 MIR-966 GUGGGUU MIMAT0005481 MIMAT0020862 2L 6045642 6045698 - D. melanogaster subgroup D. melanogaster subgroup No 1
Dsi-Mir-966 None MIR-966 GUGGGCU None None 2L 5841006 5841062 - D. melanogaster subgroup D. melanogaster subgroup No 1
Dya-Mir-966 None MIR-966 GUGGGAU None None 2L 13146739 13146794 + D. melanogaster subgroup D. melanogaster subgroup Unknown 1
Dme-Mir-967 dme-mir-967 MIR-967 GAGAUAC MIMAT0005482 MIMAT0020863 2L 12460014 12460090 - D. melanogaster subgroup D. melanogaster subgroup No 1
Dsi-Mir-967 dsi-mir-967 MIR-967 GAGAUAC MIMAT0012437 MIMAT0012438 2L 12077715 12077791 - D. melanogaster subgroup D. melanogaster subgroup No
Dya-Mir-967 None MIR-967 GAUGAUA None None 2L 8897108 8897182 - D. melanogaster subgroup D. melanogaster subgroup Unknown
Dsi-Mir-983 dsi-mir-983a MIR-983 UGAGUUC MIMAT0012525 MIMAT0012526 X 3957115 3957173 - D. melanogaster subgroup D. melanogaster subgroup No 1
Dme-Mir-991 dme-mir-991 MIR-991 UAAAGUU MIMAT0020890 MIMAT0005509 2R 20585214 20585275 - D. melanogaster subgroup D. melanogaster subgroup No 1
Dsi-Mir-991 dsi-mir-991 MIR-991 UAAAGUU MIMAT0012429 MIMAT0012430 2R 16997663 16997724 - D. melanogaster subgroup D. melanogaster subgroup No 1
Dya-Mir-991 dya-mir-991 MIR-991 UAAAGCC MIMAT0039170 MIMAT0039171 2R 12723801 12723862 + D. melanogaster subgroup D. melanogaster subgroup No 1
Dme-Mir-992 dme-mir-992 MIR-992 GGUAUCA MIMAT0020891 MIMAT0005510 2R 20585332 20585390 - D. melanogaster subgroup D. melanogaster subgroup No 1
Dsi-Mir-992 dsi-mir-992 MIR-992 CCUUUUU MIMAT0012491 MIMAT0012492 2R 16997777 16997837 - D. melanogaster subgroup D. melanogaster subgroup No
Dya-Mir-992 dya-mir-992 MIR-992 AGUAUCA MIMAT0039164 MIMAT0039165 2R 12723689 12723744 + D. melanogaster subgroup D. melanogaster subgroup No 1
Dme-Mir-1001 dme-mir-1001 MIR-1001 GGGUAAA MIMAT0005521 MIMAT0020901 3R 27642480 27642540 - D. melanogaster subgroup D. melanogaster subgroup No 1
Dsi-Mir-1001 dsi-mir-1001 MIR-1001 GGGUAAA MIMAT0012506 MIMAT0012507 3R 22893132 22893192 - D. melanogaster subgroup D. melanogaster subgroup No 1
Dya-Mir-1001 None MIR-1001 GGGUAAA None None 3R 23018709 23018769 + D. melanogaster subgroup D. melanogaster subgroup Unknown 1 1
Dme-Mir-4969 dme-mir-4969 MIR-4969 GGUAAAU MIMAT0020195 MIMAT0020196 3R 21798535 21798651 - D. melanogaster subgroup D. melanogaster subgroup No 1
Dsi-Mir-4969 None MIR-4969 GGUAAAU None None 3R 17136036 17136152 - D. melanogaster subgroup D. melanogaster subgroup No 1
Dya-Mir-4969 None MIR-4969 GGUAAAU None None 3R 18444241 18444357 - D. melanogaster subgroup D. melanogaster subgroup No 1

(red - mature/co-mature, blue - star)

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