MirGeneDB 2.1

MirGeneDB ID

Dsi-Mir-303

Family name MIR-303 (all species)
Seed UGGCAUU
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-303
Paralogues
Orthologues Dme-Mir-303  Dya-Mir-303 
Node of Origin (locus) D. melanogaster subgroup
Node of Origin (family) D. melanogaster subgroup
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)
X: 3955015-3955071 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-303)
Mir-982-P3 X: 3953288-3953349 [-] UCSC Ensembl
Mir-2582-P2 X: 3953548-3953605 [-] UCSC Ensembl
Mir-982-P2 X: 3953690-3953747 [-] UCSC Ensembl
Mir-2582-P1 X: 3954183-3954240 [-] UCSC Ensembl
Mir-982-P1 X: 3954323-3954388 [-] UCSC Ensembl
Mir-303 X: 3955015-3955071 [-] UCSC Ensembl
Mir-983 X: 3957115-3957173 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGUGUUAAAAACCAAUGUGAUCUCUUGCUUUGGCAUUAAAGGAAGCUAGUUUAAUUACGAAAACUAGUUUCCUCUAACGUUUCAAACAAUACAUCAUGUGUCGUCGCAUCGAUGAA
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Structure
        10          20        30          40        50       
UUGUGUUAAAAACCAAU--     CUC   C    --| A   A            UAAU 
                   GUGAU   UUG UUUG  GC UUA AGGAAGCUAGUU    U
                   UACUA   AAC AAAC  UG AAU UCCUUUGAUCAA    A
AAGUAGCUACGCUGCUGUG     CAU   -    UU^ C   C            AAGC 
     110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
He Wh
Mature sequence

Dsi-Mir-303_5p

mirBase accessionMIMAT0012516
Sequence
0- UUGGCAUUAAAGGAAGCUAGUU -22
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Star sequence

Dsi-Mir-303_3p*

mirBase accessionMIMAT0037362
Sequence
34- CUAGUUUCCUCUAACGUUUCAAA -57
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