| MirGeneDB ID | Dsi-Mir-966 |
|---|
| Family name |
MIR-966 (all species) |
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| Seed |
GUGGGCU |
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| Species |
Fruit fly (Drosophila simulans) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Dme-Mir-966
Dya-Mir-966
|
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| Node of Origin (locus) |
D. melanogaster subgroup
|
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| Node of Origin (family) |
D. melanogaster subgroup
|
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Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel) |
2L: 5841006-5841062 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UCGGCUGUAACCUGAUCCGCUGCUGUGGGCUGUGGGCUGUGGGCUGUAAGGCUGUGGUAUAGGUGCCGCCAGUUGAUAACCCCCAGCGUGGGCACGGCCCCACUGGUCGUCAACCGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCGGCUGUAACCUGAUCC- C --|G U C G UAA UGUGG
GCUG UGU G GCUG GGG UGU GGCUG GGC U
CGGC ACG U CGAC CCC AUA UUGAC CCG A
CGCCAACUGCUGGUCACCC - GG^G C A G CG- UGGAU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Dsi-Mir-966_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGUGGGCUGUGGGCUGUAAGGCU -23
Get sequence
|
|---|
| Star sequence |
Dsi-Mir-966_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- CCGCCAGUUGAUAACCCCCAGC -57
Get sequence
|
|---|
