MirGeneDB 3.0
MirGeneDB ID

Dsi-Mir-966

Family name MIR-966 (all species)
Species Fruit fly (Drosophila simulans)
MiRBase ID
Paralogues
Orthologues Dme-Mir-966  Dya-Mir-966 
Node of Origin (locus) D. melanogaster subgroup
Node of Origin (family) D. melanogaster subgroup
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 2L: 5841006-5841062 [-] UCSC Ensembl
Seed GUGGGCU
Precursor
(pre-Mir +30nt flank)		 
UCGGCUGUAACCUGAUCCGCUGCUGUGGGCUGUGGGCUGUGGGCUGUAAGGCUGUGGUAUAGGUGCCGCCAGUUGAUAACCCCCAGCGUGGGCACGGCCCCACUGGUCGUCAACCGC
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Structure
        10         20          30        40        50        
UCGGCUGUAACCUGAUCC-    C   --|G    U   C   G     UAA   UGUGG 
                   GCUG UGU  G GCUG GGG UGU GGCUG   GGC     U
                   CGGC ACG  U CGAC CCC AUA UUGAC   CCG     A
CGCCAACUGCUGGUCACCC    -   GG^G    C   A   G     CG-   UGGAU 
     110       100         90        80        70         60
Deep sequencing
3' NTU No
MotifsUGUG in loop
Tissue expression
- +
He Wh
Mature sequence

Dsi-Mir-966_5p
mirBase accessionNone
Sequence 
0- UGUGGGCUGUGGGCUGUAAGGCU -23
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Star sequence

Dsi-Mir-966_3p*
mirBase accessionNone
Sequence 
35- CCGCCAGUUGAUAACCCCCAGC -57
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