MirGeneDB 3.0
MirGeneDB ID

Dsi-Mir-1001

Family name MIR-1001 (all species)
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-1001
Paralogues
Orthologues Dme-Mir-1001  Dya-Mir-1001 
Node of Origin (locus) D. melanogaster subgroup
Node of Origin (family) D. melanogaster subgroup
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 3R: 22893132-22893192 [-] UCSC Ensembl
Seed GGGUAAA
Precursor
(pre-Mir +30nt flank)		 
AGCCCGCGAUGAUGUAAGCUGGCCUGUCCCUGGGUAAACUCCCAAGGAUCAGGUGGAGAUUGAAUCCCGAUCCUUGGGUUUCUGCUCUCGGGCAAGGUCAGCAGUGCCCGCGAAGGGCCCA
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Structure
        10          20         30        40        50         
AGCCCGCGAUGAUGUAA--       -|    CU     AACU          AGGUGGAG 
                   GCUGGCC UGUCC  GGGUA    CCCAAGGAUC        A
                   CGACUGG ACGGG  CUCGU    GGGUUCCUAG        U
ACCCGGGAAGCGCCCGUGA       A^    CU     CUUU          CCCUAAGU 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
He Wh
Mature sequence

Dsi-Mir-1001_5p
mirBase accessionMIMAT0012506
Sequence 
0- UGGGUAAACUCCCAAGGAUCA -21
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Star sequence

Dsi-Mir-1001_3p*
mirBase accessionMIMAT0012507
Sequence 
39- AUCCUUGGGUUUCUGCUCUCGG -61
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