MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-11621-P2b

Family name MIR-11621 (all species)
Species Red flour beetle (Tribolium castaneum)
MiRBase ID
Paralogues Tca-Mir-11621-P1  Tca-Mir-11621-P2a 
Orthologues
Node of Origin (locus) T. castaneum
Node of Origin (family) T. castaneum
Genome context
(Tcas5.2)		 KQ972170: 27366-27424 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-11621-P2b)		 Mir-11619-P1 KQ972170: 7940-7998 [-] Ensembl
Mir-3-P12b KQ972170: 8053-8111 [-] Ensembl
Mir-11617-P5 KQ972170: 9816-9873 [-] Ensembl
Mir-3851-P4d KQ972170: 11063-11122 [-] Ensembl
Mir-11618-P7 KQ972170: 11485-11543 [-] Ensembl
Mir-11618-P3b KQ972170: 11882-11940 [-] Ensembl
Mir-3851-P8b KQ972170: 12040-12099 [-] Ensembl
Mir-3851-P8a KQ972170: 24398-24457 [+] Ensembl
Mir-11618-P3a KQ972170: 24557-24615 [+] Ensembl
Mir-11618-P8 KQ972170: 25845-25903 [+] Ensembl
Mir-3851-P4c KQ972170: 26268-26327 [+] Ensembl
Mir-11621-P2b KQ972170: 27366-27424 [+] Ensembl
Mir-11617-P4 KQ972170: 27517-27574 [+] Ensembl
Mir-3-P12a KQ972170: 29279-29337 [+] Ensembl
Mir-11619-P2 KQ972170: 29392-29450 [+] Ensembl
Seed UAAAGCG
Precursor
(pre-Mir +30nt flank)		 
UGACGCAACUUCAACCAACUUUCCUUGAAAAUAAAGCGCAUUUGUCGUUGCAUCCUUAACAUAAAGGCAACGAUUCAGGUGCUUUUCUUUCAAUCAAAGUUAAUACUUCCAGAUUUUGA
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Structure
        10          20        30        40        50         
UGACGCAACUUCAACCA--|    CC      AU       AUUU        AUCCUUA 
                   ACUUU  UUGAAA  AAAGCGC    GUCGUUGC       \
                   UGAAA  AACUUU  UUUCGUG    UAGCAACG       A
AGUUUUAGACCUUCAUAAU^    CU      CU       GACU        GAAAUAC 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Mature sequence

Tca-Mir-11621-P2b_5p
mirBase accessionNone
Sequence 
0- AUAAAGCGCAUUUGUCGUUGCA -22
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Co-mature sequence

Tca-Mir-11621-P2b_3p
mirBase accessionNone
Sequence 
37- CAACGAUUCAGGUGCUUUUCUU -59
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