MirGeneDB 2.1
MirGeneDB ID

Ocu-Mir-450-P3

Family name MIR-450 (all species)
Seed UUUGCAA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-450b
Paralogues Ocu-Mir-450-P1  Ocu-Mir-450-P2 
Orthologues Bta-Mir-450-P3  Cfa-Mir-450-P3  Cpo-Mir-450-P3  Dno-Mir-450-P3  Hsa-Mir-450-P3  Mml-Mir-450-P3  Mmu-Mir-450-P3  Rno-Mir-450-P3a  Rno-Mir-450-P3b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chrX: 108850008-108850065 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P3)		 Mir-450-P3 chrX: 108850008-108850065 [-] UCSC Ensembl
Mir-450-P2 chrX: 108850173-108850229 [-] UCSC Ensembl
Mir-450-P1 chrX: 108850343-108850399 [-] UCSC Ensembl
Mir-542-v1 chrX: 108850875-108850933 [-] UCSC Ensembl
Mir-542-v2 chrX: 108850876-108850932 [-] UCSC Ensembl
Mir-12092 chrX: 108854560-108854616 [-] UCSC Ensembl
Mir-15-P2c chrX: 108855773-108855835 [-] UCSC Ensembl
Mir-15-P1c chrX: 108856105-108856163 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGUGAUAAAAGUGCAAGGUGCAGAAUUAUUUUUGCAAUAUGUUCCUGAAUAUGUAAUCUAAGUGUAUUGGGGACAUUUUGCAUCCAUAGUUUUGUAUCGAUAUGUAGAGAAAAGGCU
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Structure
        10          20        30        40         50        
UUGUGAUAAAAGUGCAA--             UUU     U       UG -|  UGUAA 
                   GGUGCAGAAUUAU   UGCAA AUGUUCC  A AUA     \
                   CUAUGUUUUGAUA   ACGUU UACAGGG  U UGU     U
UCGGAAAAGAGAUGUAUAG             CCU     U       GU A^  GAAUC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Mir-450-P3_5p
mirBase accessionMIMAT0048460
Sequence 
0- UUUUGCAAUAUGUUCCUGAAUA -22
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Star sequence

Ocu-Mir-450-P3_3p*
mirBase accessionMIMAT0048461
Sequence 
36- AUUGGGGACAUUUUGCAUCCAU -58
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