MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-450-P3

Family name MIR-450 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-450-P1  Cja-Mir-450-P2 
Orthologues Bta-Mir-450-P3  Cfa-Mir-450-P3  Cpo-Mir-450-P3  Dno-Mir-450-P3  Eca-Mir-450-P3  Hsa-Mir-450-P3  Laf-Mir-450-P3  Mml-Mir-450-P3  Mmr-Mir-450-P3  Mmu-Mir-450-P3  Ocu-Mir-450-P3  Pab-Mir-450-P3  Rno-Mir-450-P3a  Rno-Mir-450-P3b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021937.1: 126002103-126002160 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P3)		 Mir-450-P3 CM021937.1: 126002103-126002160 [-] UCSC Ensembl
Mir-450-P2 CM021937.1: 126002266-126002322 [-] UCSC Ensembl
Mir-450-P1 CM021937.1: 126002435-126002491 [-] UCSC Ensembl
Mir-542 CM021937.1: 126003574-126003632 [-] UCSC Ensembl
Mir-15-P2c CM021937.1: 126008473-126008535 [-] UCSC Ensembl
Mir-15-P1c CM021937.1: 126008803-126008861 [-] UCSC Ensembl
Seed UUUGCAA
Precursor
(pre-Mir +30nt flank)		 
UUCUGUGAUAAACAUAAGAUGCAGAAUUAUUUUUGCAAUUUGUUCCUGAAUAUAUAAUAAAGUGUAUUGGGAUCAUUUUGCAUCCAUAGUUUUGUAUCAAAACUUGCAACAAUGUUGU
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Structure
        10           20        30        40         50       
UUCUGUGAUAAACAUAA---             UUU     UU  U   UG -|   AUA 
                    GAUGCAGAAUUAU   UGCAA  UG UCC  A AUAU   A
                    CUAUGUUUUGAUA   ACGUU  AC AGG  U UGUG   U
UGUUGUAACAACGUUCAAAA             CCU     UU  U   GU A^   AAA 
      110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Mature sequence

Cja-Mir-450-P3_5p (predicted)
mirBase accessionNone
Sequence 
0- UUUUGCAAUUUGUUCCUGAAUAU -23
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Star sequence

Cja-Mir-450-P3_3p* (predicted)
mirBase accessionNone
Sequence 
34- UAUUGGGAUCAUUUUGCAUCCAUA -58
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