MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-450-P3

Family name MIR-450 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-450-P1  Pab-Mir-450-P2 
Orthologues Bta-Mir-450-P3  Cfa-Mir-450-P3  Cja-Mir-450-P3  Cpo-Mir-450-P3  Dno-Mir-450-P3  Eca-Mir-450-P3  Hsa-Mir-450-P3  Laf-Mir-450-P3  Mml-Mir-450-P3  Mmr-Mir-450-P3  Mmu-Mir-450-P3  Ocu-Mir-450-P3  Rno-Mir-450-P3a  Rno-Mir-450-P3b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054702.2: 140561771-140561828 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P3)		 Mir-450-P3 CM054702.2: 140561771-140561828 [-] UCSC Ensembl
Mir-450-P2 CM054702.2: 140561930-140561986 [-] UCSC Ensembl
Mir-450-P1 CM054702.2: 140562101-140562158 [-] UCSC Ensembl
Mir-542 CM054702.2: 140562939-140562997 [-] UCSC Ensembl
Mir-15-P2c CM054702.2: 140567917-140567979 [-] UCSC Ensembl
Mir-15-P1c CM054702.2: 140568229-140568287 [-] UCSC Ensembl
Seed UUUGCAA
Precursor
(pre-Mir +30nt flank)		 
UUCUGUGAUAAAUGUAAGAUGCAGAAUUAUUUUUGCAAUAUGUUCCUGAAUAUGUAAUAUAAGUGUAUUGGGAUCAUUUUGCAUCCAUAGUUUUGUAUCAACAUAUGGAGAAAAGUCU
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Structure
        10          20        30        40        50         
UUCUGUGAUAAAUGUAA--|            UUU     U   U    G     GUAAU 
                   GAUGCAGAAUUAU   UGCAA AUG UCCU AAUAU     \
                   CUAUGUUUUGAUA   ACGUU UAC AGGG UUAUG     A
UCUGAAAAGAGGUAUACAA^            CCU     U   U    -     UGAAU 
      110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
Br Br Li Li
Mature sequence

Pab-Mir-450-P3_5p
mirBase accessionNone
Sequence 
0- UUUUGCAAUAUGUUCCUGAAUAU -23
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Star sequence

Pab-Mir-450-P3_3p* (predicted)
mirBase accessionNone
Sequence 
36- AUUGGGAUCAUUUUGCAUCCAU -58
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