MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-450-P1

Family name MIR-450 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-450-P2  Pab-Mir-450-P3 
Orthologues Bta-Mir-450-P1  Cfa-Mir-450-P1  Cja-Mir-450-P1  Cpo-Mir-450-P1  Dno-Mir-450-P1  Eca-Mir-450-P1  Hsa-Mir-450-P1  Laf-Mir-450-P1  Mml-Mir-450-P1  Mmr-Mir-450-P1  Mmu-Mir-450-P1  Ocu-Mir-450-P1  Rno-Mir-450-P1a  Rno-Mir-450-P1b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054702.2: 140562101-140562158 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P1)		 Mir-450-P3 CM054702.2: 140561771-140561828 [-] UCSC Ensembl
Mir-450-P2 CM054702.2: 140561930-140561986 [-] UCSC Ensembl
Mir-450-P1 CM054702.2: 140562101-140562158 [-] UCSC Ensembl
Mir-542 CM054702.2: 140562939-140562997 [-] UCSC Ensembl
Mir-15-P2c CM054702.2: 140567917-140567979 [-] UCSC Ensembl
Mir-15-P1c CM054702.2: 140568229-140568287 [-] UCSC Ensembl
Seed UUUUGCG
Precursor
(pre-Mir +30nt flank)		 
UAAAGGUGACCAAAGAAAGAUGCUAAACUAUUUUUGCGAUGUGUUCCUAAUACGUAAUAUAAAUGUAUUGGGGACAUUUUGCAUUCAUAGUUUUGUAUCAAUGAUAUGGGGAAAAGAG
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Structure
        10         20        30        40        50         
UAAAGGUGACCAAAGAAA-|    U       UUU     U             GUAAU 
                   GAUGC AAACUAU   UGCGA GUGUUCCUAAUAC     \
                   CUAUG UUUGAUA   ACGUU UACAGGGGUUAUG     A
GAGAAAAGGGGUAUAGUAA^    U       CUU     U             UAAAU 
      110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut - 1 on both arms.
3' NTU No
MotifsNo
Tissue expression
- +
Br Br Li Li
Mature sequence

Pab-Mir-450-P1_5p
mirBase accessionNone
Sequence 
0- UUUUUGCGAUGUGUUCCUAAUAC -23
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Star sequence

Pab-Mir-450-P1_3p*
mirBase accessionNone
Sequence 
36- AUUGGGGACAUUUUGCAUUCAU -58
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