MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-1989-P2

Family name MIR-1989 (all species)
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-1989-P1  Lan-Mir-1989-P3 
Orthologues Agr-Mir-1989  Cte-Mir-1989  Lgi-Mir-1989  Llo-Mir-1989  Mgi-Mir-1989  Mom-Mir-1989  Npo-Mir-1989  Ofu-Mir-1989  Pau-Mir-1989  Pcr-Mir-1989  Pve-Mir-1989  Rph-Mir-1989  Sma-Mir-1989  Sme-Mir-1989  Snu-Mir-1989 
Node of Origin (locus) L. anatina
Node of Origin (family) Platytrochozoa
Genome context
(LinAna_1.0)		 LFEI01000019: 478190-478247 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1989-P2)		 Mir-1989-P3 LFEI01000019: 478000-478057 [-] Ensembl
Mir-1989-P2 LFEI01000019: 478190-478247 [-] Ensembl
Mir-1989-P1 LFEI01000019: 478556-478612 [-] Ensembl
Seed CAGCUGU
Precursor
(pre-Mir +30nt flank)		 
GGGCACAAAAGAUGAGAGCGUUGCCACAUGUCAGCUGUCAUGAUGCCUUCUUGAGUGACAAACAAAGAAGGUGCAAUGUCUGCUGGCAUGUUGCAUUGUAAAAUUACUUUGUGACAAC
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Structure
        10          20        30        40        50        
GGGCACAAAAGAUGAGA--|  U   C          UGU   GA         GAGUG 
                   GCG UGC ACAUGUCAGC   CAU  UGCCUUCUU     A
                   UGU ACG UGUACGGUCG   GUA  GUGGAAGAA     C
CAACAGUGUUUCAUUAAAA^  U   U          UCU   AC         ACAAA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
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Mature sequence

Lan-Mir-1989-P2_5p
mirBase accessionNone
Sequence 
0- UCAGCUGUCAUGAUGCCUUCUU -22
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Star sequence

Lan-Mir-1989-P2_3p* (predicted)
mirBase accessionNone
Sequence 
36- GAAGGUGCAAUGUCUGCUGGCA -58
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