Mir-101-P1-v2

MirGeneDB ID

Hsa-Mir-101-P1

Family name

MIR-101 (all species)

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-101-1

Paralogues

Hsa-Mir-101-P1-v1 Hsa-Mir-101-P2-v1

Orthologues

Aca-Mir-101-P1-v1 Ami-Mir-101-P1-v1 Bta-Mir-101-P1-v1 Cfa-Mir-101-P1-v1 Cja-Mir-101-P1-v1 Cli-Mir-101-P1-v1 Cmi-Mir-101-P1-v1 Cpi-Mir-101-P1-v1 Cpo-Mir-101-P1-v1 Dno-Mir-101-P1-v1 Dre-Mir-101-P1-v1 Eca-Mir-101-P1-v1 Ete-Mir-101-P1-v1 Gga-Mir-101-P1-v1 Gja-Mir-101-P1-v1 Gmo-Mir-101-P1-v1 Laf-Mir-101-P1-v1 Lch-Mir-101-P1 Loc-Mir-101-P1-v1 Mal-Mir-101-P1-v1 Mdo-Mir-101-P1-v1 Mml-Mir-101-P1-v1 Mmr-Mir-101-P1-v1 Mmu-Mir-101-P1-v1 Mun-Mir-101-P1-v1 Oan-Mir-101-P1-v1 Ocu-Mir-101-P1-v1 Pab-Mir-101-P1-v1 Pbv-Mir-101-P1-v1 Rno-Mir-101-P1-v1 Sha-Mir-101-P1-v1 Spt-Mir-101-P1c Spt-Mir-101-P1d Sto-Mir-101-P1-v1 Tgu-Mir-101-P1-v1 Tni-Mir-101-P1-v1 Xla-Mir-101-P1a-v1 Xla-Mir-101-P1b-v1 Xtr-Mir-101-P1-v1

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr1: 65058442-65058498 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-101-P1-v2)

Mir-101-P1-v1 chr1: 65058441-65058499 [-] UCSC Ensembl
Mir-101-P1-v2 chr1: 65058442-65058498 [-] UCSC Ensembl

Variant

Hsa-Mir-101-P1-v2

Seed

UACAGUA

Precursor
(pre-Mir +30nt flank)

CGACACAGUGACUGACAGGCUGCCCUGGCUCAGUUAUCACAGUGCUGAUGCUGUCUAUUCUAAAGGUACAGUACUGUGAUAACUGAAGGAUGGCAGCCAUCUUACCUUCCAUCAGAG

Get precursor sequence

Structure

        10          20        30        40        50        
CGACACAGUGACUGACA--|      CUGGC                  A    GUCUA 
                   GGCUGCC     UCAGUUAUCACAGUGCUG UGCU     U
                   CCGACGG     AGUCAAUAGUGUCAUGAC AUGG     U
GAGACUACCUUCCAUUCUA^      UAGGA                  -    AAAUC 
     110       100        90        80        70         60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Star sequence

Hsa-Mir-101-P1-v2_5p*

mirBase accession

MIMAT0004513

Sequence

0- CAGUUAUCACAGUGCUGAUGCU -22

Get sequence

Proposed targets

microrna.org: MIMAT0004513
TargetScanVert: hsa-miR-101-5p
TargetMiner: hsa-miR-101-5p
miRDB: MIMAT0004513

Mature sequence

Hsa-Mir-101-P1-v2_3p

mirBase accession

MIMAT0000099

Sequence

35- GUACAGUACUGUGAUAACUGAA -57

Get sequence

Proposed targets

microrna.org: MIMAT0000099
TargetScanVert: hsa-miR-101-3p.1
TargetMiner: hsa-miR-101-3p
miRDB: MIMAT0000099

Variant

Hsa-Mir-101-P1-v1

Seed

ACAGUAC

Precursor
(pre-Mir +30nt flank)

CCGACACAGUGACUGACAGGCUGCCCUGGCUCAGUUAUCACAGUGCUGAUGCUGUCUAUUCUAAAGGUACAGUACUGUGAUAACUGAAGGAUGGCAGCCAUCUUACCUUCCAUCAGAGG

Get precursor sequence

Structure

        10          20        30        40        50         
CCGACACAGUGACUGACA--|      CUGGC                  A   UGUCUA 
                    GGCUGCC     UCAGUUAUCACAGUGCUG UGC      U
                    CCGACGG     AGUCAAUAGUGUCAUGAC AUG      U
GGAGACUACCUUCCAUUCUA^      UAGGA                  -   GAAAUC 
       110       100        90        80        70         60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Star sequence

Hsa-Mir-101-P1-v1_5p*

mirBase accession

MIMAT0004513

Sequence

0- UCAGUUAUCACAGUGCUGAUGC -22

Get sequence

Proposed targets

microrna.org: MIMAT0004513
TargetScanVert: hsa-miR-101-5p
TargetMiner: hsa-miR-101-5p
miRDB: MIMAT0004513

Mature sequence

Hsa-Mir-101-P1-v1_3p

mirBase accession

MIMAT0000099

Sequence

37- UACAGUACUGUGAUAACUGAAG -59

Get sequence

Proposed targets

microrna.org: MIMAT0000099
TargetScanVert: hsa-miR-101-3p.1
TargetMiner: hsa-miR-101-3p
miRDB: MIMAT0000099