MirGeneDB 2.1
MirGeneDB ID

Dsi-Mir-3-P2

Family name MIR-3 (all species)
Seed CACUGGG
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-309
Paralogues Dsi-Mir-3-P1  Dsi-Mir-3-P3 
Orthologues Aae-Mir-3-P2a1  Aae-Mir-3-P2a2  Aae-Mir-3-P2b  Dan-Mir-3-P2  Dma-Mir-3  Dme-Mir-3-P2  Dmo-Mir-3-P2  Dpu-Mir-3  Dya-Mir-3-P2 
Node of Origin (locus) Drosophila
Node of Origin (family) Pancrustacea
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 2R: 16151557-16151615 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-3-P2)		 Mir-2-P6c 2R: 16150571-16150636 [-] UCSC Ensembl
Mir-2-P6b 2R: 16150723-16150784 [-] UCSC Ensembl
Mir-2-P6a 2R: 16150863-16150925 [-] UCSC Ensembl
Mir-2-P5 2R: 16151011-16151070 [-] UCSC Ensembl
Mir-9-P9 2R: 16151148-16151204 [-] UCSC Ensembl
Mir-279-P2 2R: 16151283-16151358 [-] UCSC Ensembl
Mir-3-P1 2R: 16151447-16151503 [-] UCSC Ensembl
Mir-3-P2 2R: 16151557-16151615 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAGUCUUAAAGUUUGGAACAGCAAUUAUACGACAAACCUUGUUCGGUUUUGCCAAUUUCCAAGCCAGCACUGGGUAAAGUUUGUCCUAUAAUCCCGAAACGACGACCAGCUAAUUGUG
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Structure
        10        20          30        40        50         
CAAGUCUUAAAGUUUGGAACAGCA--|     C       C   UU    U   CCAAUU 
                          AUUAUA GACAAAC UUG  CGGU UUG      \
                          UAAUAU CUGUUUG AAU  GUCA GAC      U
GUGUUAAUCGACCAGCAGCAAAGCCC^     C       A   GG    C   CGAACC 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
He Wh
Star sequence

Dsi-Mir-3-P2_5p*
mirBase accessionNone
Sequence 
0- CGACAAACCUUGUUCGGUUUUG -22
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Mature sequence

Dsi-Mir-3-P2_3p
mirBase accessionMIMAT0008894
Sequence 
37- GCACUGGGUAAAGUUUGUCCUA -59
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