MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-32

Family name MIR-32 (all species)
Seed AUUGCAC
Species Cow (Bos taurus)
MiRBase ID bta-mir-32
Paralogues
Orthologues Aca-Mir-32  Ami-Mir-32  Cfa-Mir-32  Cli-Mir-32  Cmi-Mir-32  Cpi-Mir-32  Cpo-Mir-32  Dno-Mir-32  Ete-Mir-32  Gga-Mir-32  Gja-Mir-32  Hsa-Mir-32  Lch-Mir-32  Mdo-Mir-32  Mml-Mir-32  Mmu-Mir-32  Mun-Mir-32  Oan-Mir-32  Ocu-Mir-32  Pbv-Mir-32  Rno-Mir-32  Sha-Mir-32  Spt-Mir-32  Sto-Mir-32  Tgu-Mir-32  Xla-Mir-32 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037335.1: 98629026-98629087 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACGCCCCAUCCUGCUUGCUCUGGUGGAGGUAUUGCACAUGACUAAGUUGCAUGUUGUCACGGCCUCAGUGCAAUUUAGUAUGUGUGAUAUUUUCACAGGAGUGCAUGCACACGGGUAUGGC
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Structure
        10          20        30        40        50        60 
GACGCCCCAUCCUGCUU--|    G          UG      A          UGUUGUCA 
                   GCUCU GUGGAGGUAU  CACAUG CUAAGUUGCA        \
                   UGAGG CACUUUUAUA  GUGUAU GAUUUAACGU        C
CGGUAUGGGCACACGUACG^    A          GU      -          GACUCCGG 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-32_5p

mirBase accessionMIMAT0009283
Sequence
0- UAUUGCACAUGACUAAGUUGCA -22
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Proposed targets TargetScanVert: bta-miR-32
Star sequence

Bta-Mir-32_3p*

mirBase accessionNone
Sequence
41- CAAUUUAGUAUGUGUGAUAUU -62
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