MirGeneDB ID | Bta-Mir-32 |
Family name |
MIR-32 (all species) |
Seed |
AUUGCAC |
Species |
Cow (Bos taurus) |
MiRBase ID |
bta-mir-32
|
Paralogues |
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Orthologues |
Aca-Mir-32
Ami-Mir-32
Cfa-Mir-32
Cli-Mir-32
Cmi-Mir-32
Cpi-Mir-32
Cpo-Mir-32
Dno-Mir-32
Ete-Mir-32
Gga-Mir-32
Gja-Mir-32
Hsa-Mir-32
Lch-Mir-32
Mdo-Mir-32
Mml-Mir-32
Mmu-Mir-32
Mun-Mir-32
Oan-Mir-32
Ocu-Mir-32
Pbv-Mir-32
Rno-Mir-32
Sha-Mir-32
Spt-Mir-32
Sto-Mir-32
Tgu-Mir-32
Xla-Mir-32
|
Node of Origin (locus) |
Gnathostomata
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Node of Origin (family) |
Gnathostomata
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Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037335.1: 98629026-98629087 [-]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
GACGCCCCAUCCUGCUUGCUCUGGUGGAGGUAUUGCACAUGACUAAGUUGCAUGUUGUCACGGCCUCAGUGCAAUUUAGUAUGUGUGAUAUUUUCACAGGAGUGCAUGCACACGGGUAUGGC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GACGCCCCAUCCUGCUU--| G UG A UGUUGUCA
GCUCU GUGGAGGUAU CACAUG CUAAGUUGCA \
UGAGG CACUUUUAUA GUGUAU GAUUUAACGU C
CGGUAUGGGCACACGUACG^ A GU - GACUCCGG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), UGUG in loop |
Tissue expression
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Ad |
Cd |
Fe |
Bo |
Br |
Ce |
Co |
Co |
De |
He |
Hy |
Ir |
Ki |
La |
Lo |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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Mature sequence |
Bta-Mir-32_5p |
mirBase accession | MIMAT0009283 |
Sequence |
0- UAUUGCACAUGACUAAGUUGCA -22
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-32
|
Star sequence |
Bta-Mir-32_3p* |
mirBase accession | None |
Sequence |
41- CAAUUUAGUAUGUGUGAUAUU -62
Get sequence
|