MirGeneDB

MirGeneDB ID

Aca-Mir-32

Family name MIR-32 (all species)
Seed AUUGCAC
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-32
Paralogues
Orthologues Ami-Mir-32  Bta-Mir-32  Cfa-Mir-32  Cli-Mir-32  Cpi-Mir-32  Cpo-Mir-32  Dno-Mir-32  Ete-Mir-32  Gga-Mir-32  Hsa-Mir-32  Mdo-Mir-32  Mml-Mir-32  Mmu-Mir-32  Oan-Mir-32  Ocu-Mir-32  Rno-Mir-32  Sha-Mir-32  Sto-Mir-32  Tgu-Mir-32 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(anoCar2)
6: 57468294-57468355 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGCUCCCAUUCUGCUUGCUCUGGUGGGGAUAUUGCACAUUACUAAGUUGCAUGUUGUCACGGGCUCAGUGCAAUUUAGUGUGUGCGAUAUUUUCACAUGAGUGCAUGCACACAGGUAUGGC
Get precursor sequence
Structure
        10          20        30        40        50        60 
AAGCUCCCAUUCUGCUU--|   UG   GG            U           UGUUGUCA 
                   GCUC  GUG  GAUAUUGCACAU ACUAAGUUGCA        \
                   UGAG  CAC  UUAUAGCGUGUG UGAUUUAACGU        C
CGGUAUGGACACACGUACG^   UA   UU            -           GACUCGGG 
120       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
 +
Sk To Wh
Mature sequence

Aca-Mir-32_5p

MirBase accessionMIMAT0021932
Sequence
0- UAUUGCACAUUACUAAGUUGCA -22
Get sequence
Star sequence

Aca-Mir-32_3p*

MirBase accessionMIMAT0021933
Sequence
41- CAAUUUAGUGUGUGCGAUAUU -62
Get sequence